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AT4G26555.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:21531424 (2011): plastid
  • PMID:18431481 (2008): plastid
  • PMID:16923014 (2006): plastid plastid thylakoid
FP Images

Arabidopsis cell culture (plastidal marker)

At4g26555-GFP
(full-length)
plastidal marker-RFPoverlay

Images by Sandra Tanz
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : FKBP-like peptidyl-prolyl cis-trans isomerase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G19830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EC:5.2.1.8eggNOG:COG5102eggNOG:ENOG410JRY4EMBL:AF439821
EMBL:AK117832EMBL:AL022223EMBL:AL078465EMBL:AL161565
EMBL:AY125564EMBL:CP002687EnsemblPlants:AT4G26555EnsemblPlants:AT4G26555.1
entrez:828762GeneID:828762Genevisible:Q944B0GO:GO:0003755
GO:GO:0006457GO:GO:0009507GO:GO:0009543Gramene:AT4G26555.1
hmmpanther:PTHR10516hmmpanther:PTHR10516:SF250HOGENOM:HOG000077684InParanoid:Q944B0
InterPro:IPR001179InterPro:IPR023566KEGG:ath:AT4G26555OMA:ENQIIKG
PANTHER:PTHR10516PaxDb:Q944B0Pfam:PF00254Pfam:Q944B0
Pfscan:PS50059PhylomeDB:Q944B0PIR:T05049PRIDE:Q944B0
PRO:PR:Q944B0PROSITE:PS50059ProteinModelPortal:Q944B0Proteomes:UP000006548
RefSeq:NP_567750.1SMR:Q944B0STRING:3702.AT4G26555.1SUPFAM:SSF54534
TAIR:AT4G26555UniGene:At.22413UniProt:Q944B0
Coordinates (TAIR10) chr4:-:13404622..13406178
Molecular Weight (calculated) 22694.70 Da
IEP (calculated) 7.67
GRAVY (calculated) 0.02
Length 207 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMAMEISLP FVGSSMALSA GKSRNSVSRI SRVGFSSVSA VHVPRRMFMQ LSGFGSVLTL LDFPSLAAPV PQMKEPEVIR TLKLPSGVRY QEIIEGEGRE
101: AHEGDLVELN YVCRRANGYF VHSTVDQFSG ESSPVKLILD ENDVIEGLKE VLVGMKAGGK RRALIPPSVG YINETLKPIP EEFGPRRSLL SHANEPLVFE
201: IQLLKVL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)