AT4G26555.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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FP Images |
Arabidopsis cell culture (plastidal marker)
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : FKBP-like peptidyl-prolyl cis-trans isomerase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G19830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:13404622..13406178 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 22694.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.67 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 207 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAMAMEISLP FVGSSMALSA GKSRNSVSRI SRVGFSSVSA VHVPRRMFMQ LSGFGSVLTL LDFPSLAAPV PQMKEPEVIR TLKLPSGVRY QEIIEGEGRE 101: AHEGDLVELN YVCRRANGYF VHSTVDQFSG ESSPVKLILD ENDVIEGLKE VLVGMKAGGK RRALIPPSVG YINETLKPIP EEFGPRRSLL SHANEPLVFE 201: IQLLKVL |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)