AT4G24750.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Rhodanese/Cell cycle control phosphatase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G08920.1); Has 333 Blast hits to 333 proteins in 88 species: Archae - 9; Bacteria - 119; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:12758422..12760749 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32115.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.02 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 292 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESLSLPVLN PLLASGSNLF RNQHSRMTSS MVSSLKSPIG GTSLSTVRRF GVGVVRMQAV DEDIDLKQMR DIAAAKKRWD GLLREGKVKL LTPREAGYAI 101: SLSNKPLLDV RPSSERNKAW IKGSTWVPIF DNDDNLDAGT LSKKVTSFAM GGWWSGAPTL SFNRLFLSKV EEKFPKDSEL IVACQKGLRS LAACELLYNA 201: GYENLFWVQG GLESAQDEDL VTEGVQPLKL AGIGGFSEFL GWTDQQRAQA AKEGWGYRLV YTARLFGVVL AADALFVGAQ QLGHYIQELR GH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)