AT4G09150.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.981 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : T-complex protein 11 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
T-complex protein 11; FUNCTIONS IN: phosphopantetheine binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: T-complex 11 (InterPro:IPR008862), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: T-complex protein 11 (TAIR:AT1G22930.1). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:5828753..5833475 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 122981.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.20 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||
| Length | 1098 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MTEPERLGGI SLSFPVNEED TVTTTSPKTL PRRLRRRLLE PKSPVSAAEI DSKLREADLR RQQYYESLSS KARPKMRSPR SGSIEELSQR LESKLNAAEQ 0101: KRLSILEKEL ARLAKMDEAR QAAKNGLEQR VEKERDELES KVEERVLKAE KNRMLLFKAM AQRRAAKRQR AAQSLMKKAI QETRYKESVR AAIYQKRAAA 0201: ESKRMGILEA ERRRANARLT RVFGAASSVR SQKEAERRKM KDRLEERLQR AKKLKAQYMR RRRGMDSCSS SRSETMRKNQ VHLVRMLVRC WRRFAKYKKS 0301: TFVLARAYHE LGINEKSIES VPFEQFAIQM NSVSVIQTVK ALLDRLEIRL TLSKASNVEN INHLLKHIFP PVRRGKSPSP MSKGEQNSPN SKMGYQKLKK 0401: IARYPARIFL CAYMIKQHPG AIFRGRGEHE IALVESATCL IREFELLVKV ILEGPESTLP GNVSFVAQRP KKFRSQLEAF DKAWCSYLEG FVVWKINDAK 0501: LLEKDLARTQ ESELSEVSKH TSSPKIIDSG LNQKTVKASS PTNRALFSET DGARESKAPA DSHLPSSSSP SPGSSNLSPS LNSAGSEAIS TPNVVANSFD 0601: AALASENEVI VNEIVHDNSS SFADSLDPNT GDTSNLQVRV KETMEKAFWD GVMESMKQSQ PDFSWVIKLM KEVRDELCEI SPKDWRQEIV QTIDTDVLSQ 0701: LLASGNVDMG YLGNILEFSL GILLKLSAPA NEEEIRVTHH KLMTELGEIV PTDGHSNSSY AVLMVKGLRF VLQQIQILKK EISKSRLKLL EPLLKGPAGL 0801: EYLKKSFSSR HGSPDQASSS LPLTKRWLLS VRGEAEREWK EHKDALSAVI NNHSGSSGLP STTMRTGGNV SSVSKVNTPS SPFPGIELSE CKGETVDLLV 0901: RIGLLKMVSE IGGLTLETVP ETFQLNLSRL RDVQSQIQKI TLVSISVLIL QQTLVSENSS SIDMEAITRT CINRLYEMLD AKPDAGLSEI METLSELLDS 1001: NDAETKKQVI ANMLVKSLQA GDAVFTHVSQ TIYLAIRAAV LAGNNTKRKQ LVETMLRKIG AASLSDKVIE VSDILVLVAT VSRSVHGLWY EELLKKPN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)