AT4G08390.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : stromal ascorbate peroxidase | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a chloroplastic stromal ascorbate peroxidase sAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
stromal ascorbate peroxidase (SAPX); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: thylakoidal ascorbate peroxidase (TAIR:AT1G77490.1); Has 9797 Blast hits to 7922 proteins in 1252 species: Archae - 60; Bacteria - 2389; Metazoa - 388; Fungi - 725; Plants - 3386; Viruses - 0; Other Eukaryotes - 2849 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:5314999..5317071 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40281.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.19 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||||||||||||||
| Length | 371 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAERVSLTLN GTLLSPPPTT TTTTMSSSLR STTAASLLLR SSSSSSRSTL TLSASSSLSF VRSLVSSPRL SSSSSLSQKY RIASVNRSFN STTAATKSSS 101: SDPDQLKNAR EDIKELLSTK FCHPILVRLG WHDAGTYNKN IKEWPQRGGA NGSLRFDIEL KHAANAGLVN ALNLIKDIKE KYSGISYADL FQLASATAIE 201: EAGGPKIPMK YGRVDASGPE DCPEEGRLPD AGPPSPATHL REVFYRMGLD DKDIVALSGA HTLGRSRPER SGWGKPETKY TKEGPGAPGG QSWTPEWLKF 301: DNSYFKEIKE KRDEDLLVLP TDAAIFEDSS FKVYAEKYAA DQDAFFKDYA VAHAKLSNLG AEFNPPEGIV I |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)