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AT3G56090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ferritin 3
Curator
Summary (TAIR10)
Encodes FERRITIN 3, AtFER3. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool.
Computational
Description (TAIR10)
ferritin 3 (FER3); FUNCTIONS IN: oxidoreductase activity, ferric iron binding, binding, transition metal ion binding; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferritin, N-terminal (InterPro:IPR001519), Ferritin-related (InterPro:IPR012347), Ferritin-like (InterPro:IPR009040), Ferritin, conserved site (InterPro:IPR014034), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Ferritin/Dps protein (InterPro:IPR008331); BEST Arabidopsis thaliana protein match is: ferritin 4 (TAIR:AT2G40300.1); Has 4599 Blast hits to 4597 proteins in 1326 species: Archae - 171; Bacteria - 2117; Metazoa - 1703; Fungi - 11; Plants - 352; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink).
Protein Annotations
EC:1.16.3.1eggNOG:COG1528eggNOG:KOG2332EMBL:AK226273
EMBL:AY122951EnsemblPlants:AT3G56090EnsemblPlants:AT3G56090.1entrez:824775
ExpressionAtlas:Q0WWR6Gene3D:1.20.1260.10GeneID:824775GO:GO:0004322
GO:GO:0005623GO:GO:0006826GO:GO:0006879GO:GO:0008199
Gramene:AT3G56090.1hmmpanther:PTHR11431hmmpanther:PTHR11431:SF41InterPro:IPR001519
InterPro:IPR008331InterPro:IPR009040InterPro:IPR009078InterPro:IPR012347
InterPro:IPR014034KEGG:ath:AT3G56090KO:K00522OMA:ISSPGMH
PANTHER:PTHR11431PaxDb:Q0WWR6Pfam:PF00210Pfam:Q9LYN2
Pfscan:PS50905PhylomeDB:Q0WWR6PRIDE:Q0WWR6PROSITE:PS00204
PROSITE:PS50905ProteinModelPortal:Q0WWR6RefSeq:NP_191168.1scanprosite:PS00204
SMR:Q0WWR6STRING:3702.AT3G56090.1SUPFAM:SSF47240TAIR:AT3G56090
tair10-symbols:ATFER3tair10-symbols:FER3UniGene:At.20042UniGene:At.67841
UniProt:Q0WWR6UniProt:Q9LYN2
Coordinates (TAIR10) chr3:-:20814350..20815984
Molecular Weight (calculated) 28838.20 Da
IEP (calculated) 5.62
GRAVY (calculated) -0.29
Length 259 amino acids
Sequence (TAIR10)
(BLAST)
001: MLLKAASTFS LLNIHGEKKD ISPLFSSSSS ISSPVSSGKS GNLSFPLRAS KSSTTTTSTL SGVVFEPFEE VKKEMDLVPS GQQLSLARHL YSPECEAAVN
101: EQINVEYNVS YVYHALYAYF DRDNVALKGL AKFFKESSVE EREHAELLME YQNKRGGRVK LQPMVLPQSE FDHPEKGDAL YAMELALSLE KLVNEKLLNL
201: HSVASKNDDV QLADFIESVF LNEQVEAIKK ISEYVSQLRR LGKGHGTWHF DQELLGAAA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)