AT3G15410.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.927 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat (LRR) family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:5203380..5207279 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64853.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.95 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||
| Length | 590 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDRILKAART SGSLNLSNRS LNFDPITWDV PTEVYQCLET TGEGENWWEA VDLQKLILAH NDIEVLREDL KNLACLVVLN VSHNKLSQLP AAIGELTAMK 101: SLDVSFNSIS ELPEQIGSAI SLVKLDCSSN RLKELPDSIG RCLDLSDLKA TNNQISSLPE DMVNCSKLSK LDVEGNKLTA LSENHIASWT MLAELNACKN 201: MLGVLPQNIG SLSRLIRLDL HQNKISSVPP SIGGCSSLVE FYLGINSLST LPAEIGDLSR LGTLDLRSNQ LKEYPVGACK LKLSYLDLSN NSLTGLHPEL 301: GNMTTLRKLV LVGNPLRTLR SSLVNGPTAA LLKYLRSRLS NSEETSASTP TKENVIASAA RMSISSKELS LEGLNLSDVP SEVWESGEIT KVNLSKNSIE 401: ELPAQLSTSV SLQTLILSRN KIKDWPGAIL KSLPNLMCLK LDNNPLNQIP LDGFQVVSGL QILDLSVNAV SFREHPKFCH LPQLRELYLS RIQLSEVPED 501: ILNLSNLIIL DLNQNSLQSI PKGIKNMTSL KHLDISNNNI SSLPPELGLL EPTLEVLRLD GNPLRSIRRP ILERGTKAVL NYLKDRLPDQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)