AT3G14890.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phosphoesterase | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
phosphoesterase; FUNCTIONS IN: DNA binding, catalytic activity, zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Polynucleotide kinase 3 phosphatase, central region (InterPro:IPR013954), Zinc finger, PARP-type (InterPro:IPR001510), Polynucleotide kinase 3, phosphatase (InterPro:IPR015636), DNA 3-phosphatase (InterPro:IPR006551); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:5008751..5013060 | ||||||||||||
| Molecular Weight (calculated) | 76235.10 Da | ||||||||||||
| IEP (calculated) | 6.47 | ||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||
| Length | 684 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MITVAPFVSL RFQFPLYIIN RSTLFFRERT QYLVYNTCHI LRTTAKTMPV VAEYAKSNRS SCRSCSNKIA VKSLRLGLIS KGRGGVDMTR WHHFDCFPTD 101: SESIASVDDI QGLSALEKED QDALTKLVEQ CGKVPAKKPD EKKGKAKKHI MGPKGLTKAA TSSKVIADNA KSSRSSCNRC SQTIVSKDLR VGLVTEDSRG 201: FDITRWHHLG CFPIDFHPID SVEDIGGYSS LEKGDQMELK YLAEDVQKMD EGDDEAIADN ELTEETKKGK HSPVAKLVEQ PGEPAKEDED EESKKPASDE 301: ISEQKTKDVK NSPDSSKVIS EYAKSSRSTC KKCSQTIAAK ELRLGLVTRN FRGFDMKQWH HLGCFPVDSD PIVSVEDIGG FSELQSGDQD ALKELVQQCG 401: KQTLVDKMDE DNDDTEAKIK LTEETNKRKH SEVGEMVEED ESLTKAKQQM AKTHKVNMSE STSQVEVEAE ITLSASDVKD KYRDANLLPK WKAFETVIFL 501: ERDDGLNDSE KIAAFDFDGC LAKTSVKIVG ADAWSLMYPS IPEKLQSLHD QGYKLVIFTN ESNIDRWKNK RQAAVDSKIG RLNSFIERVK VPIQVFIACG 601: VSSSGGKGGK DDLYRKPKAG MWQLMKKHFN SGIAIDMDKS FYVGDAAGRK MDHSDADIKF AQASGLKFFT PEEYFIPSST SPGT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)