AT3G13225.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : WW domain-containing protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
WW domain-containing protein; CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); Has 1723 Blast hits to 1069 proteins in 210 species: Archae - 2; Bacteria - 74; Metazoa - 564; Fungi - 222; Plants - 86; Viruses - 6; Other Eukaryotes - 769 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:4258928..4262853 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 97573.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.44 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.85 | ||||||||||||||||||||||||||||||||
| Length | 892 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKRKERRYA AMNSTGRRVK LDLFAEPSGD LGGSDVRDGV EREQTELNEL PNSPSSSGQK TENPLLLLGQ YSDDEVEEDS DKKADDTSAD SFLANKNEQV 101: DGLIQGGHKD TNIKSGAVTT TMQMADQQQT GENSSALDSR AEVETGYTTV SNSTTLDGLN KQTVPSVQAS GSVSLEHQAP TDVTSQWKMI LHEESNQYYY 201: WNTETGETSW ELPTVLTQTT FAYGTGYNES GPMVTDASTL ISSVEPSYFV PVQNSFTGTD YSTFPTVELD GRNKSEDLYV KSLGTDGHQV ECRIDSVVSC 301: QEDLSRPGNS DHVHTYFDAG AATDLPSRLL SQIESLLEKL RSLKRSHGNF HSNEQITKYI LEVEVRHSDV KALILDTSPL LSFWLHTEKQ LKRLEDSVND 401: EIYQLAKSAV MDEPETNKSP PKEKLVADAN TESESEDSER DGELAQSGKS LHSDESADGS GDGSPKHSPN HPAGQSDIIP STEMLQKAGS PDVEDVDMDV 501: DMEVEESVPV SSVQVIDASD GKMFSQTEPS NLHTDVPPPP GEEWIPPPPS ESEDVPPPPP DSYSEPIPPP PDNGHVASSL SSDSLGVPYT VPQSYMHQSA 601: DYATQYNLSY PESNYQYTNA VTLAPNTQFY GHVDGSQVSL PQSTFYYETV PGTTEVVPAA ASAGEAYYDF NGAAPLFPVI SSGESSLHHS GVGSANHHIP 701: NNSSTAAVPS SRSNDSTEVG SSATASKSTD VTSGSSLLAK GQTKVKRTKK KTVAATSTLR SNKKVSSLVD KWKAAKEELN DSEEEEDDSE ILDRKRKREI 801: EEWKSRQIAS GEAKDNANFQ PLGGDWREKV KRKRERAEKS QKKDPEKQQK PDLTKLSANL PSEWQAYWDE STKKVYYGNT STSQTSWTRP TT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)