AT3G02930.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.981 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant protein of unknown function (DUF827) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant protein of unknown function (DUF827); LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G16730.1). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:655158..658319 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 91623.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.72 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.95 | ||||||||||||||||||||||||
| Length | 804 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGTQNGLSDT TLRKSSSTSL RVPRLTRIVT KPDSNSPSPT QQQSRLSFER PSSNSKPSTD KRSPKAPTPP EKTQIRAVRV SESQPQSVQI KEDLKKANEL 101: IASLENEKAK ALDQLKEARK EAEEASEKLD EALEAQKKSL ENFEIEKFEV VEAGIEAVQR KEEELKKELE NVKNQHASES ATLLLVTQEL ENVNQELANA 201: KDAKSKALCR ADDASKMAAI HAEKVEILSS ELIRLKALLD STREKEIISK NEIALKLGAE IVDLKRDLEN ARSLEAKVKE LEMIIEQLNV DLEAAKMAES 301: YAHGFADEWQ NKAKELEKRL EEANKLEKCA SVSLVSVTKQ LEVSNSRLHD MESEITDLKE KIELLEMTVA SQKVDLEKSE QKLGIAEEES SKSEKEAEKL 401: KNELETVNEE KTQALKKEQD ATSSVQRLLE EKKKILSELE SSKEEEEKSK KAMESLASAL HEVSSESREL KEKLLSRGDQ NYETQIEDLK LVIKATNNKY 501: ENMLDEARHE IDVLVNAVEQ TKKQFESAMV DWEMREAGLV NHVKEFDEEV SSMGKEMNRL GNLVKRTKEE ADASWEKESQ MRDCLKEVED EVIYLQETLR 601: EAKAETLKLK GKMLDKETEF QSIVHENDEL RVKQDDSLKK IKELSELLEE ALAKKHIEEN GELSESEKDY DLLPKVVEFS EENGYRSAEE KSSKVETLDG 701: MNMKLEEDTE KKEKKERSPE DETVEVEFKM WESCQIEKKE VFHKESAKEE EEDLNVVDQS QKTSPVNGLT GEDELLKEKE KKKKKTLFGK VGNLLKKKGP 801: VNQK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)