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AT2G34710.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator
Summary (TAIR10)
Dominant PHB mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Has overlapping functions with PHAVOLUTA, REVOLUTA and CORONA.
Computational
Description (TAIR10)
PHABULOSA (PHB); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT1G30490.1); Has 3393 Blast hits to 3288 proteins in 275 species: Archae - 0; Bacteria - 20; Metazoa - 905; Fungi - 114; Plants - 2320; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Protein Annotations
BioGrid:3382eggNOG:ENOG410IFI0eggNOG:ENOG410XQ3REMBL:AC003096EMBL:AJ441291EMBL:AY099791EMBL:BT000335
EMBL:CP002685EMBL:Y11122EnsemblPlants:AT2G34710EnsemblPlants:AT2G34710.1entrez:818036Gene3D:1.10.10.60Gene3D:3.30.530.20
GeneID:818036Genevisible:O04291GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0008289
GO:GO:0009855GO:GO:0009944GO:GO:0009955GO:GO:0010014GO:GO:0010072GO:GO:0030154GO:GO:0080060
Gramene:AT2G34710.1hmmpanther:PTHR24326hmmpanther:PTHR24326:SF191HOGENOM:HOG000272677InParanoid:O04291IntAct:O04291InterPro:IPR001356
InterPro:IPR002913InterPro:IPR009057InterPro:IPR013978InterPro:IPR023393KEGG:ath:AT2G34710KO:K09338ncoils:Coil
OMA:KQLWHHSPaxDb:O04291Pfam:O04291Pfam:PF00046Pfam:PF01852Pfam:PF08670Pfscan:PS50071
Pfscan:PS50848PhylomeDB:O04291PIR:T01364PRIDE:O04291PRO:PR:O04291PROSITE:PS50071PROSITE:PS50848
ProteinModelPortal:O04291Proteomes:UP000006548RefSeq:NP_181018.1SMART:SM00234SMART:SM00389SMR:O04291STRING:3702.AT2G34710.1
SUPFAM:SSF46689SUPFAM:SSF55961TAIR:AT2G34710tair10-symbols:ATHB-14tair10-symbols:ATHB14tair10-symbols:PHBtair10-symbols:PHB-1D
UniGene:At.37771UniProt:O04291
Coordinates (TAIR10) chr2:-:14639548..14643993
Molecular Weight (calculated) 93223.00 Da
IEP (calculated) 6.15
GRAVY (calculated) -0.22
Length 852 amino acids
Sequence (TAIR10)
(BLAST)
001: MMMVHSMSRD MMNRESPDKG LDSGKYVRYT PEQVEALERV YTECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR EKQRKEAARL QTVNRKLNAM
101: NKLLMEENDR LQKQVSNLVY ENGHMKHQLH TASGTTTDNS CESVVVSGQQ HQQQNPNPQH QQRDANNPAG LLSIAEEALA EFLSKATGTA VDWVQMIGMK
201: PGPDSIGIVA ISRNCSGIAA RACGLVSLEP MKVAEILKDR PSWLRDCRSV DTLSVIPAGN GGTIELIYTQ MYAPTTLAAA RDFWTLRYST CLEDGSYVVC
301: ERSLTSATGG PTGPPSSNFV RAEMKPSGFL IRPCDGGGSI LHIVDHVDLD AWSVPEVMRP LYESSKILAQ KMTVAALRHV RQIAQETSGE VQYGGGRQPA
401: VLRTFSQRLC RGFNDAVNGF VDDGWSPMGS DGAEDVTVMI NLSPGKFGGS QYGNSFLPSF GSGVLCAKAS MLLQNVPPAV LVRFLREHRS EWADYGVDAY
501: AAASLRASPF AVPCARAGGF PSNQVILPLA QTVEHEESLE VVRLEGHAYS PEDMGLARDM YLLQLCSGVD ENVVGGCAQL VFAPIDESFA DDAPLLPSGF
601: RIIPLEQKST PNGASANRTL DLASALEGST RQAGEADPNG CNFRSVLTIA FQFTFDNHSR DSVASMARQY VRSIVGSIQR VALAIAPRPG SNISPISVPT
701: SPEALTLVRW ISRSYSLHTG ADLFGSDSQT SGDTLLHQLW NHSDAILCCS LKTNASPVFT FANQTGLDML ETTLVALQDI MLDKTLDEPG RKALCSEFPK
801: IMQQGYAHLP AGVCASSMGR MVSYEQATVW KVLEDDESNH CLAFMFVNWS FV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)