AT2G32850.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 3 (TAIR:AT5G08160.1); Has 91647 Blast hits to 90290 proteins in 2701 species: Archae - 81; Bacteria - 10784; Metazoa - 33910; Fungi - 10357; Plants - 19846; Viruses - 210; Other Eukaryotes - 16459 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:13935448..13937977 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 74515.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.20 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.77 | ||||||||||||||||||||||||||||||||||||
| Length | 670 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWKFKPFAQK EPAGLEGRFL EIGNLKVQVR NVIAEGGFSS VYLAQDVNHA SKQYALKHMI CNDEESLELV MKEISVLKSL KGHPNVVTLY AHGILDMGRN 101: KKEALLAMDF CGKSLVDVLE NRGAGYFEEK QALTIFRDVC NAVFAMHCQS PRIAHRDLKA ENLLLSSDGQ WKLCDFGSVS TNHKIFERAE EMGIEEDNIR 201: KYTTPTYRAP EMWDLFRREM ISEKVDIWAL GCLLFRICYF KNAFDGESKL QILNGNYRIP ESPKYSVFIT DLIKEMLQAS PDERPDITQI WFRVNEQLPA 301: NLQKSLPDRP PEMQSTGVHD GSSKSATKPS PAPRRSPPPP PPSSGESDSG GPLGAFWATQ HAKTSVVSED NKNMPKFDEP NSNTSKSERV RVDSHQPKKP 401: SPVRGEARGI QRNKDLETTI SQKNTTPAAA NNMTRVSKDD AFNSFVADFD TTKFDNGNKP GKEEALEAEI QRLKDELKQT KSEKAEITAK FEKLSAICRS 501: QRQELQDLKQ TLASKSASPS PSRDSSQNQP SPGMHSMSST PSRDKMEGTM WELQQDRSNW STGSSDTNSW QPFSDEAKPV MESASKGNNN TINQSVRTRS 601: KPASAAGTQG FEPWGFETES FRAAATSAAA TSASGTQRSM GSGNSTSQRY GNSKMRENQK TAQPAGWAGF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)