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AT2G31580.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.677
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : tRNAHis guanylyltransferase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
tRNAHis guanylyltransferase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: tRNAHis guanylyltransferase (InterPro:IPR007537); BEST Arabidopsis thaliana protein match is: tRNAHis guanylyltransferase (TAIR:AT2G32320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
EC:2.7.7.79eggNOG:COG4021eggNOG:KOG2721EMBL:AC007071EMBL:CP002685EnsemblPlants:AT2G31580EnsemblPlants:AT2G31580.1
entrez:817716GeneID:817716Genevisible:F4IRQ5GO:GO:0000086GO:GO:0000287GO:GO:0005525GO:GO:0005654
GO:GO:0006400GO:GO:0006974GO:GO:0008193GO:GO:0008283Gramene:AT2G31580.1hmmpanther:PTHR12729hmmpanther:PTHR12729:SF6
HOGENOM:HOG000084111InParanoid:F4IRQ5InterPro:IPR007537InterPro:IPR024956InterPro:IPR025845iPTMnet:F4IRQ5KEGG:ath:AT2G31580
KO:K10761OMA:SQVHEFEPANTHER:PTHR12729PaxDb:F4IRQ5Pfam:F4IRQ5Pfam:PF04446Pfam:PF14413
PIR:E84722PRIDE:F4IRQ5PRO:PR:F4IRQ5ProteinModelPortal:F4IRQ5Proteomes:UP000006548RefSeq:NP_565727.2SMR:F4IRQ5
STRING:3702.AT2G31580.1TAIR:AT2G31580UniGene:At.44770UniProt:F4IRQ5
Coordinates (TAIR10) chr2:-:13441137..13445837
Molecular Weight (calculated) 66221.70 Da
IEP (calculated) 7.30
GRAVY (calculated) -0.41
Length 567 amino acids
Sequence (TAIR10)
(BLAST)
001: MINSVGVVRK EAENCNCLQV FFVSGSFKVD SVEAKKKEEN FRETLRDMAN SKYEYVKSFE LEDEVMLPNL MVVRIDGRDF SRFSQVHEFE KPNDETALNL
101: MNSCSAAVLE EFPDIIFAYG YSDEYSFVFK KTSRFYQRRA SKILSLVASF FAAVYVTKWK EFFPQRKLLY APSFSSKVVS CASAEVLQAY LAWRQQDCHA
201: NNQYDTCFWM LVKSGKSVSE TQEILKDTQK QQKNELLFQK FGINYKTLPE LFRQGSCLFK KKVEETVKHD ENGNPVKRLR RKAVFVHSEN IAGRSFWNEQ
301: PSLYNDLGHF TKDIGKIEPD FIRSFQFENK LLPLTWVVVR IDGCHFHRFS DVHEFEKPND EQALKLMNSC AVAVLEEFED IHFAYGVSDE YSFVLKKESE
401: LYKRQSSKII SAVASFFTST YVLQWGEFFP HKELKYPPSF DGRAVCYPTY NILLDYLAWR QVDCHINNQY NTCFWMLVKS GKNKTQSQDY LKGTQTREKN
501: ELLSRQFGIE YNSLPVIFRM GSSVFRLKEA ENGVVSGKKL EGEVVVDHCN IIERCFWEEH LHILSYS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)