AT2G28800.4
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : 63 kDa inner membrane family protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence. | ||||||||||||||||||||||||
| Computational Description (TAIR10) |
ALBINO 3 (ALB3); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: OxaA/YidC-like membrane insertion protein (TAIR:AT1G24490.1). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:12356669..12359158 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 47074.40 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.82 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||
| Length | 432 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MARVLVSSPS SFFGSPLIKP SSSLRHSGVG GGGTAQFLPY RSNNNKLFTT STTVRFSLNE IPPFHGLDSS VDIGAIFTRA ESLLYTIADA AVVGADSVVT 101: TDSSAVQKSG GWFGFISDAM ELVLKILKDG LSAVHVPYAY GFAIILLTII VKAATYPLTK QQVESTLAMQ NLQPKIKAIQ QRYAGNQERI QLETSRLYKQ 201: AGVNPLAGFF WIPSLGGPTS IAARQSGSGI SWLFPFVDGH PPLGWYDTVA YLVLPVLLIA SQYVSMEIMK PPQTDDPAQK NTLLVFKFLP LMIGYFALSV 301: PSGLSIYWLT NNVLSTAQQV YLRKLGGAKP NMDENASKII SAGRAKRSIA QPDDAGERFR QLKEQEKRSK KNKAVAKDTV ELVEESQSES EEGSDDEEEE 401: AREGALASST TSKPLPEVGQ RRSKRSKRKR TV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)