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AT2G26550.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : heme oxygenase 2
Curator
Summary (TAIR10)
Encodes a heme oxygenase-like protein lacking the conserved histidine residue at the active site that is usually involved in heme-iron coordination. It is unable to bind and degrade heme. Mutant analyses suggest a role in photomorphogenesis. The protein can bind the heme precursor, proto IX, which could be biologically significant and point to a role in the regulation of the two tetrapyrrole biosynthetic pathways.
Computational
Description (TAIR10)
heme oxygenase 2 (HO2); CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), Haem oxygenase-like (InterPro:IPR016053), Haem oxygenase (decyclizing), plant (InterPro:IPR016951); BEST Arabidopsis thaliana protein match is: Plant haem oxygenase (decyclizing) family protein (TAIR:AT2G26670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5398eggNOG:KOG4480EMBL:CP002685EnsemblPlants:AT2G26550EnsemblPlants:AT2G26550.1entrez:817196ExpressionAtlas:F4IUM0
Gene3D:1.20.910.10GeneID:817196GO:GO:0004392GO:GO:0006788GO:GO:0009507GO:GO:0010024Gramene:AT2G26550.1
hmmpanther:PTHR35703hmmpanther:PTHR35703:SF1InterPro:IPR016053InterPro:IPR016084iPTMnet:F4IUM0ncoils:CoilOMA:MEGFVKY
PaxDb:F4IUM0Pfam:PF01126PRIDE:F4IUM0ProteinModelPortal:F4IUM0Proteomes:UP000006548RefSeq:NP_180223.2STRING:3702.AT2G26550.1
SUPFAM:SSF48613TAIR:AT2G26550tair10-symbols:HO2UniGene:At.52925UniProt:F4IUM0
Coordinates (TAIR10) chr2:-:11291584..11293426
Molecular Weight (calculated) 41165.90 Da
IEP (calculated) 5.27
GRAVY (calculated) -0.58
Length 354 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLLRPTPL LSTPRKLTHS HLHTSISFPF QISTQRKPQK HLLNLCRSTP TPSQQKASQR KRTRYRKQYP GENIGITEEM RFVAMRLRNV NGKKLDLSED
101: KTDTEKEEEE EEEDDDDDDE VKEETWKPSK EGFLKYLVDS KLVFDTIERI VDESENVSYA YFRRTGLERC ESIEKDLQWL REQDLVIPEP SNVGVSYAKY
201: LEEQAGESAP LFLSHFYSIY FSHIAGGQVL VRQESSIYRE FCWFLVYFSH IAGGQVICKT ASLIELEIDI DIVDSGELGL SGVLRLWWVS EKLLEGKELE
301: FNRWEGDAQD LLKGVREKLN VLGEHWSRDE KNKCLKETAK AFKYMGQIVR LIIL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)