AT2G26550.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : heme oxygenase 2 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a heme oxygenase-like protein lacking the conserved histidine residue at the active site that is usually involved in heme-iron coordination. It is unable to bind and degrade heme. Mutant analyses suggest a role in photomorphogenesis. The protein can bind the heme precursor, proto IX, which could be biologically significant and point to a role in the regulation of the two tetrapyrrole biosynthetic pathways. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
heme oxygenase 2 (HO2); CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), Haem oxygenase-like (InterPro:IPR016053), Haem oxygenase (decyclizing), plant (InterPro:IPR016951); BEST Arabidopsis thaliana protein match is: Plant haem oxygenase (decyclizing) family protein (TAIR:AT2G26670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:11291584..11293426 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41165.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.27 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.58 | ||||||||||||||||||||||||||||||||||||
| Length | 354 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASLLRPTPL LSTPRKLTHS HLHTSISFPF QISTQRKPQK HLLNLCRSTP TPSQQKASQR KRTRYRKQYP GENIGITEEM RFVAMRLRNV NGKKLDLSED 101: KTDTEKEEEE EEEDDDDDDE VKEETWKPSK EGFLKYLVDS KLVFDTIERI VDESENVSYA YFRRTGLERC ESIEKDLQWL REQDLVIPEP SNVGVSYAKY 201: LEEQAGESAP LFLSHFYSIY FSHIAGGQVL VRQESSIYRE FCWFLVYFSH IAGGQVICKT ASLIELEIDI DIVDSGELGL SGVLRLWWVS EKLLEGKELE 301: FNRWEGDAQD LLKGVREKLN VLGEHWSRDE KNKCLKETAK AFKYMGQIVR LIIL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)