AT3G28460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : methyltransferases | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA methylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00095 (InterPro:IPR004398); Has 4869 Blast hits to 4869 proteins in 1755 species: Archae - 2; Bacteria - 3296; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 1522 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:10672673..10674297 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34813.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.59 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||
| Length | 314 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVLLSSFSP LGINIDMNKN LGVSYSSFPQ IHLFKGSTPL RVRTFVVSSR KNSGTGLASE DKKLLLERYG YDANDDFGSQ SKKARRKEEK MSGRNSQQVE 101: EVVVVQPRTT HRLLQVLAGT AKRKKLLSLK GMDVRPMMEV VKGAAFGILQ AAGGCPTSLR PGRWLDLYSG TGSVGIEAIS RGCSEAHFVE MDPWVVSNVL 201: QPNLEHTGFV DASVIHTARV ENFLERADKL VGKDGVFDYI SVTPPYMEVD YEVLMDQIAK SPAIGENTFI LVEYPSRTTM LDSCGCLEKM TDRRFGRTHL 301: AIYGPKWAQK PRKS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)