AT2G20050.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.948 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, protein amino acid dephosphorylation, regulation of protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), cAMP/cGMP-dependent protein kinase (InterPro:IPR002373), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein kinase, catalytic domain (InterPro:IPR000719), Cyclic nucleotide-binding-like (InterPro:IPR018490), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G06270.1). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:8649779..8654193 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 121095.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.81 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1091 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MGCAYSKTCI GQICATKENS IRQTHQQAPS RGGTRATAAA AAVEEDNPVF NFSSDAVDDV DNDEIHQLGL SRDQEWGITR LSRVSSQFLP PDGSRVVKVP 0101: SCNYELRCSF LSQRGYYPDA LDKANQDSFA IHTPFGSNSD DHFFGVFDGH GEFGAQCSQF VKRRLCENLL RHGRFRVDPA EACNSAFLTT NSQLHADLVD 0201: DSMSGTTAIT VMVRGRTIYV ANAGDSRAVL AEKRDGDLVA VDLSIDQTPF RPDELERVKL CGARVLTLDQ IEGLKNPDVQ CWGTEEDDDG DPPRLWVPNG 0301: MYPGTAFTRS IGDSIAETIG VVANPEIAVV ELTPDNPFFV VASDGVFEFI SSQTVVDMVA KHKDPRDACA AIVAESYRLW LQYETRTDDI TIIVVHIDGL 0401: KDDAPRQLSS TGTQLQPPIP QVVELTGSES PSTFGWNSKN QRVRHDLSRA RIRAIENSLE NGHAWVPPSP AHRKTWEEEA HIERVLRDHF LFRKLTDSQC 0501: QVLLDCMQRL EANPGDIVVK QGGEGDCFYV VGSGEFEVLA TQNGEVPRIL QRYTAEKQSS FGELALMHNK PLQASVRAVD HGTLWALKRE DFRGILMSEF 0601: SNLASLKLLR SVDLLSRLTI LQLSHVAESL SEACFSDGQT IVTKDQKLQG LYVIQKGRVK ISFCTEVLES QNVSSLTTGI TNEYDNLEIG TEVSIEKHEG 0701: SYFGEWALLG ELKDSLSVVA VGEVVCVVLT KENFESAVGP LTNISDDGPK TRHSSFELSK ESAKVTDTTA LAKATLADLE WTTCLSTTDC SEIGLVHLKD 0801: KENLLSLKRF SKQKVKKLGK EAQVLKERNL MKNVIKPSAI VPEILCTCVD QTFAAILLNT TLACPISSLL HSPLDESSVR FITGSLVSAI EDIHKNEILF 0901: RGSSPELLML DQSGYLQIVD FRFAKKLSGE RTFTICGNAD YLAPEIVQGK GHGYAADWWA LGVLIYYMLE GEMPFGSWRE SELDTFQKIA KGQLTFPRVL 1001: SSEAEDLITK LLEVDENLRF GSQGGPESIK KHPWFNGLKW EAISNREFQV PQEIISRIHH HLENDNVLPL ETSKSLDTTE DQDAQNWLEE W |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)