AT1G77580.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.994 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant protein of unknown function (DUF869) | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G21810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29144191..29146793 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 87840.80 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.47 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.76 | ||||||||||||||||||||||||||||||||||||
| Length | 779 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKRKRESSE RSFGESESVS SLSEKDSEIQ PESTMESRDD EIQSPTVSLE VETEKEELKD SMKTLAEKLS AALANVSAKD DLVKQHVKVA EEAVAGWEKA 101: ENEVVELKEK LEAADDKNRV LEDRVSHLDG ALKECVRQLR QARDEQEQRI QDAVIERTQE LQSSRTSLEN QIFETATKSE ELSQMAESVA KENVMLRHEL 201: LARCEELEIR TIERDLSTQA AETASKQQLD SIKKVAKLEA ECRKFRMLAK SSASFNDHRS TDSHSDGGER MDVSCSDSWA SSTLIEKRSL QGTSSSIELD 301: LMGDFLEMER LVALPETPDG NGKSGPESVT EEVVVPSENS LASEIEVLTS RIKELEEKLE KLEAEKHELE NEVKCNREEA VVHIENSEVL TSRTKELEEK 401: LEKLEAEKEE LKSEVKCNRE KAVVHVENSL AAEIEVLTSR TKELEEQLEK LEAEKVELES EVKCNREEAV AQVENSLATE IEVLTCRIKQ LEEKLEKLEV 501: EKDELKSEVK CNREVESTLR FELEAIACEK MELENKLEKL EVEKAELQIS FDIIKDKYEE SQVCLQEIET KLGEIQTEMK LVNELKAEVE SQTIAMEADA 601: KTKSAKIESL EEDMRKERFA FDELRRKCEA LEEEISLHKE NSIKSENKEP KIKQEDIETA AGKLANCQKT IASLGKQLQS LATLEDFLTD TPIIPMAANG 701: VSSSSNSESW KVHKNETFMT RNHPESIKPT KETSPSSSSS TASAAVSMPV STNRGSSEKN RNGFATVFTR SKDGIHLAI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)