AT1G70620.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cyclin-related | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
cyclin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 95268 Blast hits to 52287 proteins in 2120 species: Archae - 101; Bacteria - 11250; Metazoa - 43040; Fungi - 13274; Plants - 9970; Viruses - 1254; Other Eukaryotes - 16379 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:26626634..26630307 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 97086.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.71 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.25 | ||||||||||||||||||||||||
| Length | 884 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDAYQPPPQY LRPPSGPPPP TDPYHQYYQH QARPPVPPPT QPGGPPAWYS NQFHHPHSPS PPPPPPPQWG PPSPHYPQGQ PYSSPAYPPH QPPFNAGANG 101: NSQFPPPSTG APIPPPYPQA NQEWGNPNWG YQQQQGHTPQ ANSNVEDWAV KAKEWAAANK DQQSQQSAPN QPSGQVYQQQ YPTHGYQDFH QQAVPGVSYQ 201: QHQQFPVPPT TQPERYPNYA TGNESFPGVG LPQENLPTSS AIHQQERLVT HKLCTPSELK LVTLFARKEE SGNTTQHEVH ISLPDGGGPV HTEQHMQYAY 301: GDQSAAPPSN FSDHNAWQPH TTSGVVYPPI PSSAQSIPQH DSSMAIPPVS GHIMPPYGRF PPPNPQPVGP PYAFGTKPPL HPVAAFMDDS YAASSVPPKK 401: APVPNWLKEE LLKKKADLGR PSSGRFEERE SMDDDVLYKP PTKADQPDKK SFSPSNSSDE EEEDEMDAAR TTEINMEIKR ILTEVLLKVT DELFDEIATK 501: VINEDEAIPK DDSVQHNHKL SSSLLSTADP LHKASAKILV SVEGANTKAS SGSPADVLGL ASYASDDDDA DTDAASDANA DENGVESLGV GSRHNVSQQP 601: STEKLPDPEA MASAKLDPAV GVNANSGKNS KSGLEDYSQM PGSTRKDDEA GSTKISDVSA SSGLDDDTSG SRKEHPDRTD SDKDAILDEP HVKNSGVKSD 701: CNLRQDSNKP YGKDLSDEVS TDRSRIVETK GGKEKGDSQN DSKDRMKEND LKSAEKVKGV ESNKKSTDPH VKKDSRDVER PHRTNSKEDR GKRKEKEKEE 801: ERSRHRRAEN SSKDKRRRSP TSNESSDDSK RKSRSRRRSV SPSPVRSRRK RSSPSSDESS DDSKRKSSSK RKNRSPSPGK SRRR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)