AT1G69040.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.987 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ACT domain repeat 4 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
ACT-domain containing protein involved in feedback regulation of amino acid metabolism | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ACT domain repeat 4 (ACR4); FUNCTIONS IN: amino acid binding; INVOLVED IN: regulation of cellular amino acid metabolic process, response to cytokinin stimulus; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 5 (TAIR:AT2G03730.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:25957843..25960079 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51255.80 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.89 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.40 | ||||||||||||||||||||||||||||||||||||
| Length | 455 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDVSMSFSQD MDNEYEKLIR RMNPPRVVID NDSCKKATVI RVDSANEYGI LLEVVQILTD LNLTITKAYI SSDGGWFMDV FNVTDQDGNK VTDEVVLDYI 101: QKSLGPEACF STSMRSVGVI PSTDSTVIEL TGCDRPGLLS ELSAVLTHLK CSVLNAEIWT HNTRAAAVMQ VTDDLTGCGI SDPERLSRIK NLLRNVLKGS 201: NTPREAKTVV SHGEVHTDRR LHQMMFEDRD YEHRLVDDDS SIQDERQRPD VCVDNWLDKD YSVVTVRCKD RPKLLFDTVC TLTDMQYVVF HGSVDTEGTE 301: AFQEYYVRHI DGSPVKSEAE KQRVIQCLEA AIKRRVSEGL KLELCTTDRV GLLSNVTRIF RENSLTVTRA EVKTKGGKAL NTFYVSDASG YSIDAKTIDS 401: IRQTIGQTIL KVKNNPQEQQ QRQKSPSHES PTRFLFGGLF KSKSFVNFGL VRSYS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)