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AT1G70560.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.936
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : tryptophan aminotransferase of Arabidopsis 1
Curator
Summary (TAIR10)
TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln.
Computational
Description (TAIR10)
tryptophan aminotransferase of Arabidopsis 1 (TAA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: tryptophan aminotransferase related 1 (TAIR:AT1G23320.1); Has 469 Blast hits to 469 proteins in 134 species: Archae - 44; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G70560-MONOMERBioCyc:MetaCyc:AT1G70560-MONOMERBRENDA:2.6.1.27BRENDA:2.6.1.99
EC:2.6.1.27EC:2.6.1.99eggNOG:ENOG410II7NeggNOG:ENOG41114NM
EMBL:AC010796EMBL:AC011663EMBL:AK117208EMBL:BT005339
EMBL:CP002684EnsemblPlants:AT1G70560EnsemblPlants:AT1G70560.1entrez:843393
EvolutionaryTrace:Q9S7N2Gene3D:2.10.25.30Gene3D:3.40.640.10Gene3D:3.90.1150.10
GeneID:843393Genevisible:Q9S7N2GO:GO:0004021GO:GO:0004838
GO:GO:0005737GO:GO:0009641GO:GO:0009684GO:GO:0009723
GO:GO:0009908GO:GO:0009958GO:GO:0010078GO:GO:0010087
GO:GO:0016846GO:GO:0030170GO:GO:0042742GO:GO:0047312
GO:GO:0048364GO:GO:0048366GO:GO:0048367GO:GO:0048467
GO:GO:0050048GO:GO:0050362GO:GO:0080097GO:GO:0080098
GO:GO:0080099GO:GO:0080100GO:GO:0080130Gramene:AT1G70560.1
gramene_pathway:2.6.1.-gramene_pathway:2.6.1.2gramene_pathway:2.6.1.27gramene_pathway:2.6.1.42
gramene_pathway:2.6.1.57gramene_pathway:2.6.1.58gramene_pathway:ALANINE-DEG3-PWYgramene_pathway:ALANINE-SYN2-PWY
gramene_pathway:LEU-DEG2-PWYgramene_pathway:LEUSYN-PWYgramene_pathway:PWY-5079gramene_pathway:PWY-581
gramene_pathway:TYRSYNgramene_plant_reactome:1119486gramene_plant_reactome:6874054hmmpanther:PTHR11751
hmmpanther:PTHR11751:SF367HOGENOM:HOG000237549InParanoid:Q9S7N2InterPro:IPR006947
InterPro:IPR006948InterPro:IPR015421InterPro:IPR015422InterPro:IPR015424
KEGG:ath:AT1G70560KO:K16903OMA:WEGDAWGPaxDb:Q9S7N2
PDB:3BWNPDB:3BWOPDBsum:3BWNPDBsum:3BWO
Pfam:PF04864Pfam:Q9S7N2PhylomeDB:Q9S7N2PIR:F96729
PRIDE:Q9S7N2PRO:PR:Q9S7N2ProteinModelPortal:Q9S7N2Proteomes:UP000006548
RefSeq:NP_177213.1SMR:Q9S7N2STRING:3702.AT1G70560.1SUPFAM:SSF53383
TAIR:AT1G70560tair10-symbols:SAV3tair10-symbols:TAA1tair10-symbols:WEI8
UniGene:At.27817UniPathway:UPA00151UniProt:Q9S7N2
Coordinates (TAIR10) chr1:+:26604894..26607319
Molecular Weight (calculated) 44803.40 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.46
Length 391 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKLENSRKP EKISNKNIPM SDFVVNLDHG DPTAYEEYWR KMGDRCTVTI RGCDLMSYFS DMTNLCWFLE PELEDAIKDL HGVVGNAATE DRYIVVGTGS
101: TQLCQAAVHA LSSLARSQPV SVVAAAPFYS TYVEETTYVR SGMYKWEGDA WGFDKKGPYI ELVTSPNNPD GTIRETVVNR PDDDEAKVIH DFAYYWPHYT
201: PITRRQDHDI MLFTFSKITG HAGSRIGWAL VKDKEVAKKM VEYIIVNSIG VSKESQVRTA KILNVLKETC KSESESENFF KYGREMMKNR WEKLREVVKE
301: SDAFTLPKYP EAFCNYFGKS LESYPAFAWL GTKEETDLVS ELRRHKVMSR AGERCGSDKK HVRVSMLSRE DVFNVFLERL ANMKLIKSID L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)