AT1G64650.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.522 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Major facilitator superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G27720.1); Has 856 Blast hits to 849 proteins in 287 species: Archae - 16; Bacteria - 476; Metazoa - 88; Fungi - 64; Plants - 135; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24023805..24026048 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46214.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.76 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.46 | ||||||||||||||||||||||||||||||||
| Length | 421 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNLCPWRHLA GDWLQGPYVY YLYSTYGFGK GEIGQLFIAG FGSSMLFGTI VGSLADKQGR KRASITYCIT YILSCITKHS PQYKVLMVGR VLGGIATSLL 101: FSAFESWLVA EHNKRGFEQQ WLSVTFSKAI FLGNGLVAII AGLFGNYLVD SLSLGPVAPF DAAACFLAIG MAVIISSWSE NYGDPSENKD LLTQFKNAAS 201: AIASDEKIAL LGAIQSLFEG SMYTFVFLWT PALSPNEEDI PHGFIFATFM LASMLGSSIA SRLLAHSSPK VESYMQIVFV ISSAALMLPV VTSFLVAPSG 301: VKGGSISFSG CIQLMGFCTF EACVGIFWPS IMKMRSQYIP EEARSTIMNF FRIPLNIFVC LVLYNVDAFP MTVMFGMCSV FLFVASILQR RLMNVAEIHK 401: SRSQEWSAEK EMTSEADPLN P |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)