AT1G23230.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.885 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:8244481..8251741 | ||||||||
| Molecular Weight (calculated) | 177656.00 Da | ||||||||
| IEP (calculated) | 7.50 | ||||||||
| GRAVY (calculated) | -0.04 | ||||||||
| Length | 1592 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
0001: MDQSQRTVAA TPSSSRSYQF HPARAAIIDL FNLYLGRGSR QKPDESLRDP PNKSQKRVHA PNRDLPPRNE QFLLDFELLQ SQFNDPEQLR TITESVLISL 0101: VVQCSNHAPR AEFLLFALRT LCRISYINWD TFLPSLLSSV SAAEASLSQG VQAAAATAGS SATSSQSVVP VSVNPTSLLP SAHGIGSPSA SEVKSVENGQ 0201: QIARAGQIVR ENAMRNSQRI RAAAVNSLRQ LSCKIILIGV ESSLKPVTHA EIFQYMMNWL VNWDRRDLGT EDSVGKSWRS EKTLAEWLRS CLDVIWLLVE 0301: EGESRIPFYE LLRSGLQFIE NIPDDEALFT LIMEIHRRRD AMAMHMLMLD QHLHCPSFGT HRIVSQITAN VPPEAVPHLR HSPITYPSVL GEPLYGEDLA 0401: MSIPKGSLDW ERAVRCIRHA IRTTPSPDWW KRVLVVAPCY RPSTQAGPIP GAVFTSDMIC EAIIDRIVEL LKLTNSDANC WQEWLVFSDI FFFLIKSGCT 0501: DFVDFIDKLV LRLNGVDNHI LRTNHVTWLL AQIIRVELVM TALNSDAKKV ETTRKILSFH REDRNSDPNN PQSVLLDFVS SCQNLRIWSL STTTRAYLNN 0601: EQLLKGKQID EWWRSKGERM MDYMNMDDRS IGMFWVVSYT MAQPACETVI NWLSSAGMAE LPGLQPNDRV MMTQEVTPLP MSLLSGFSMN LCLKLALQME 0701: EALFVSQVVP SIAMVETYTR LLLISPHSMF RSHFSRNASL LSKPGVTLLV LEILNYRLLP LYRYQGKSKT LMYDVTKIIS ALKGKRGDHR IFRLAENLCM 0801: NLILSLRDFF SVKREGKGPT EFTETLNRIT IMTLAITIKT RGIADPDHMV YLQTMLEQIL ATSQHTWSEK TMRHFPSLLR ETLKGRVDKR GLSIQAWQQA 0901: ETTVINQCTQ LLSPSAEPAY VSTYLSHSFP QHRQYLCAGA CLLMQGHAEN INSTNLARVL REVSPEEVTA NIYTLVDVLL HHVHVDLQQG QSLEAVLDKA 1001: GANLAFFFWT HEMLPLDIFL LALIDRDDDP HALIIAMSLL KTPDLLLRIK NYCQNRGSPE HWLVTQVFKR NELQKALGNH LSWKDRYPTF FDDIAARLLP 1101: VIPLVLYRLI ENNAMEQADN LLLAHSHFLA YHPLRFTFVR DILAYFYGHL PGKLVLRMLK VLDLSKIPFS ESFPQYISPT GAPVCPPLDY FASLLLNLVN 1201: NVIPPLSSSS NCSSRSGSMA DILNSSARPP HGKTPGTSQP GPANASEGQK AFYQIQDPGT YTQLVLETAV IEILSLPVSA AQIVSSLVQI IVNIQSTLIQ 1301: SGNGFHGAAN GVGQGSVLPT SPSGGSTDSM SASRSTCLIP GINTASFVSR SGYTCQQLSC LLIQACGLLL AQLPPDFHVQ LYLEAARVTR ETWWLKDGKR 1401: SQGELDSAVG YALMDPTWAA QDNTSTAIGN IVALLHAFFS NLPQEWLDGT NAIITNLRPV TSVAMLRVVF RIMGPLLPRL ASTHTLFNKT LMLLLSALVD 1501: VFGKTAQTTA PVEASQIADL IDFLHHIIHY EGQGGAVQTS SKPRPDILAL IGRAAETLRP DVQHLLAHLK TNPNSSIYAA AHQQNTAKTN TS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)