AT1G23170.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function DUF2359, transmembrane | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function DUF2359, transmembrane; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2359, transmembrane (InterPro:IPR019308); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G70770.2). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:8212724..8215516 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66675.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.58 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||
| Length | 615 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDPIESVEYN GFETTNGNSH NDDHGWKKVV YPKRNRKQKP ADQAAATKNG VTGNLIPNGT LSNGGGNVFR SLEEQAEGRH LQILAAKKAS DTADVSDGGR 101: SKWRSNGYGD EGYDFDDSDS EIAVGKENLK AEEVKKPKVK KVKKPKVTLA EAAAKIDVSN LAAFLVEASE SYASQPEIQL MKFADYFGRS LSQVSSAHFP 201: WVKTFKESPL SKLIDIPLSH IPEAVYKTSA DWINQRPIEA LGAFVLWGLD CILADLAVQQ GGVKGGKKGA QQASSKSQVA IFVAVAMVLR KKPDALTNIL 301: PTLRENPKYQ GQDKLPVTVW MMAQASQGDI SVGLYSWAHN LLPVVSSKSC NPQSRDLILQ LVERILSNPK ARTILVNGAV RKGERLIPPP SFEILVRLTF 401: PASSARVKAT ERFEAIYPLL KEVSLAGAPG SKAMKQVTQQ IFTFALKAAG EENPLLAKEA AAITIWALTQ NVDCCKHWEN LYTDNLKASV AVLKKLIGEW 501: KERSVKLTPA ETLTLNQTMK SLRQKNEEAL TEGGNGVSQS LYKDADKYCK VIAGKLSSGG CIKSIATTAA LLAATGFAGA AALSANPEAI AYLKNLVESL 601: DINKFTETVM TALKN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)