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AT1G10865.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.800
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 241 Blast hits to 241 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 94; Plants - 38; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J1KYeggNOG:ENOG410XXM6EMBL:AK118760EMBL:CP002684EnsemblPlants:AT1G10865EnsemblPlants:AT1G10865.1entrez:5007681
ExpressionAtlas:Q8GWM1GeneID:5007681Gramene:AT1G10865.1hmmpanther:PTHR28627HOGENOM:HOG000243245InterPro:IPR018793KEGG:ath:AT1G10865
KO:K18178OMA:ECAKERPPfam:PF10203PhylomeDB:Q8GWM1Proteomes:UP000006548RefSeq:NP_001077513.1SwissPalm:Q8GWM1
TAIR:AT1G10865UniGene:At.16752UniGene:At.64974UniProt:Q8GWM1
Coordinates (TAIR10) chr1:-:3614789..3615308
Molecular Weight (calculated) 7918.69 Da
IEP (calculated) 8.93
GRAVY (calculated) -0.56
Length 71 amino acids
Sequence (TAIR10)
(BLAST)
1: MAKSCKGLAE ELVKCLSESI CVKGEKRSIR DCTGEKSPCI PSECVGLRET YFNCKRGQVD MRARIRGNKG Y
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)