suba logo
AT5G09225.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
extracellular 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J7X6eggNOG:ENOG410Z2Y1EMBL:AK117447EMBL:BT005034
EMBL:CP002688EnsemblPlants:AT5G09225EnsemblPlants:AT5G09225.1entrez:2745982
GeneID:2745982GO:GO:0016021Gramene:AT5G09225.1hmmpanther:PTHR36392
hmmpanther:PTHR36392:SF1HOGENOM:HOG000243639KEGG:ath:AT5G09225OMA:QTITPVY
PhylomeDB:Q8GYQ7Proteomes:UP000006548RefSeq:NP_974752.1TAIR:AT5G09225
TMHMM:TMhelixUniGene:At.48013UniProt:Q8GYQ7
Coordinates (TAIR10) chr5:-:2869556..2870379
Molecular Weight (calculated) 7850.56 Da
IEP (calculated) 10.89
GRAVY (calculated) -0.23
Length 68 amino acids
Sequence (TAIR10)
(BLAST)
1: MPHRTRPLKG LLLFTGINFV LVQTITPVYD FVCFLPYWER RRERIRQERE AAAASLNSTQ KATQASVG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)