AT1G08420.2
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.964 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : BRI1 suppressor 1 (BSU1)-like 2 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
BRI1 suppressor 1 (BSU1)-like 2 (BSL2); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Metallophosphoesterase (InterPro:IPR004843), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 3 (TAIR:AT2G27210.2). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:2649959..2656564 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 108087.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.59 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 1013 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MDEDSSMVAD NDQDREFQSL DGGQSPSPME RETPQQMNDQ SPPPEGGSVP TPPPSDPNPA TSQQQAAAVV GQEQQPALVV GPRCAPTYSV VDAMMDKKED 0101: GPGPRCGHTL TAVPAVGDEG TPGYIGPRLV LFGGATALEG NSGGTGTPTS AGSAGIRLAG ATADVHCYDV LSNKWTRLTP FGEPPTPRAA HVATAVGTMV 0201: VIQGGIGPAG LSAEDLHVLD LTQQRPRWHR VVVQGPGPGP RYGHVMALVG QRYLMAIGGN DGKRPLADVW ALDTAAKPYE WRKLEPEGEG PPPCMYATAS 0301: ARSDGLLLLC GGRDANSVPL ASAYGLAKHR DGRWEWAIAP GVSPSSRYQH AAVFVNARLH VSGGALGGGR MVEDSSSVAA GVWCDTKSVV TSPRTGRYSA 0401: DAAGGDASVE LTRRCRHAAA AVGDLIFIYG GLRGGVLLDD LLVAEDLAAA ETTYAASHAA AAAATNSPPG RLPGRYGFSD ERNRELSESA ADGAVVLGSP 0501: VAPPVNGDMH TDISPENALL PGTRRTNKGV EYLVEASAAE AEAISATLAA AKARQVNGEV ELPDRDCGAE ATPSGKPTFS LIKPDSMGSM SVTPAGIRLH 0601: HRAVVVAAET GGALGGMVRQ LSIDQFENEG RRVSYGTPES ATAARKLLDR QMSINSVPKK VIAHLLKPRG WKPPVRRQFF LDCNEIADLC DSAERIFASE 0701: PTVLQLKAPI KIFGDLHGQF GDLMRLFDEY GSPSTAGDIS YIDYLFLGDY VDRGQHSLET ISLLLALKVE YQHNVHLIRG NHEAADINAL FGFRIECIER 0801: MGERDGIWVW HRINRLFNWL PLAASIEKKI ICMHGGIGRS INHVEQIENI QRPITMEAGS IVLMDLLWSD PTENDSVEGL RPNARGPGLV TFGPDRVMEF 0901: CNNNDLQLIV RAHECVMDGF ERFAQGHLIT LFSATNYCGT ANNAGAILVL GRDLVVVPKL IHPLPPALSS PETSPERHIE DTWMQELNAN RPATPTRGRP 1001: QNSNDRGGSL AWM |
||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)