AT1G06890.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.984 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : nodulin MtN21 /EamA-like transporter family protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
nodulin MtN21 /EamA-like transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT2G30460.2). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:2111585..2114038 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 38549.80 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.21 | ||||||||||||||||||||||||
| GRAVY (calculated) | 0.58 | ||||||||||||||||||||||||
| Length | 353 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSEGQKFQLG TIGALSLSVV SSVSIVICNK ALISTLGFTF ATTLTSWHLL VTFCSLHVAL WMKMFEHKPF DPRAVMGFGI LNGISIGLLN LSLGFNSVGF 101: YQMTKLAIIP CTVLLETLFF RKKFSRKIQF SLTILLLGVG IATVTDLQLN MLGSVLSLLA VVTTCVAQIM TNTIQKKFKV SSTQLLYQSC PYQAITLFVT 201: GPFLDGLLTN QNVFAFKYTS QVVFFIVLSC LISVSVNFST FLVIGKTSPV TYQVLGHLKT CLVLAFGYVL LRDPFDWRNI LGILVAVIGM VVYSYYCSIE 301: TQQKASETST QLPQMKESEK DPLIAAENGS GVLSDGGGGV QQKTVAPQRS RGD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)