AT5G54830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein; FUNCTIONS IN: dopamine beta-monooxygenase activity, monooxygenase activity; INVOLVED IN: histidine catabolic process, metabolic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Electron transfer DM13 (InterPro:IPR019545), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G61750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:22273394..22276117 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 100538.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.44 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 907 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MCDQRPNLLG SLVLLGFFIF FVNGEECSNS SSLIGHESEF KMLQHQLRGV FTVVDDCSFR VSRFDMLSGS EVHWWGAMSS DFDNMTNDGF VISDQKLNQT 101: FKNSSFIVRL LGNVTWDKLG VVSVWDLPTA SDFGHVLLSN ATESDTSKAE SPPSESNDVA PGKSNNSEPF KAPTMFDNCK KLSDKYRLRW SLNAEKGYVD 201: IGLEATTGLL NYMAFGWAKP NSTSNLMLNA DVVVTGIRED GFPFADDFYI TESSVCSVKE GTATGVCPDT VYEEADSVGS SVNNTKLVYG HRIDGVSFVR 301: YRRPLNDSDN KFDFPVNSTE SLTVIWALGV IKPPDVINPY YLPVNHGGVE SENFGHFSLN LSDHVDECLG PLDADNKYDQ DVIIADAHAP LVVTAGPSVH 401: YPNPPNPSKV LYINKKEAPV LKVERGVPVK FSIEAGHDVS FYITSDFLGG NASLRNRTET IYAGGQETHG VLSSPSELVW APNRNTPDQL YYHSIFQEKM 501: GWKVQVVDGG LSDMYNNSVN LDDQQVKFFW TIVGDSISIA ARGEKKSGYL AIGFGSEMTN SYAYIGWFDR NGTGHVNTYW IDGESASAVH PTTENMTYVR 601: CKSEEGIITL EFTRPLKPSC SHRDRPECKN MIDPTTPLKV IWAMGAKWTD GQLTERNMHS VTSQRPVRVM LTRGSAEADQ DLRPVLGVHG FMMFLAWGIL 701: LPGGILSARY LKHIKGDGWF KIHMYLQCSG LAIVFLGLLF AVAELNGFSF SSTHVKFGFT AIVLACAQPV NAWLRPAKPA QGELISSKRL IWEYSHSIVG 801: QSAVVVGVVA LFTGMKHLGE RNGTENVDGL NLALGLWVFL CVVTVAYLEY RERGRRRARN LSRGNWVLGN VEEDDSIDLI DSRGGFRDKD DEDRNGGRME 901: IQLEPLK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)