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AT5G16500.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.960
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G02810.1); Has 200394 Blast hits to 156502 proteins in 5222 species: Archae - 339; Bacteria - 26270; Metazoa - 73030; Fungi - 18373; Plants - 36753; Viruses - 1149; Other Eukaryotes - 44480 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G16500-MONOMEReggNOG:COG0515eggNOG:KOG1187EMBL:CP002688
EMBL:DQ446955EnsemblPlants:AT5G16500EnsemblPlants:AT5G16500.1entrez:831511
Gene3D:2.60.120.200GeneID:831511GO:GO:0004674GO:GO:0005524
GO:GO:0005737GO:GO:0005886GO:GO:0010183GO:GO:0090404
Gramene:AT5G16500.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF96HOGENOM:HOG000116550
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441KEGG:ath:AT5G16500ncoils:CoilOMA:EENHETR
Pfam:PF00069Pfscan:PS50011PhylomeDB:Q1PDW3PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548Reactome:R-ATH-450302
Reactome:R-ATH-450321RefSeq:NP_197154.2scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q1PDW3STRING:3702.AT5G16500.1SUPFAM:SSF56112
TAIR:AT5G16500UniGene:At.50461UniProt:Q1PDW3
Coordinates (TAIR10) chr5:-:5386733..5389003
Molecular Weight (calculated) 71555.50 Da
IEP (calculated) 4.40
GRAVY (calculated) -0.95
Length 636 amino acids
Sequence (TAIR10)
(BLAST)
001: MIIMMNCFPC FTSQKSRNAP CTTNETNDDN VEHDEFRPPV VATTKRTEER EPAEQQPPVK TFNFRELATA TKNFRQECLL GEGGFGRVYK GTLQSTGQLV
101: AVKQLDKHGL HGNKEFLAEV LSLAKLEHPN LVKLIGYCAD GDQRLLVFEY VSGGSLQDHL YEQKPGQKPM DWITRMKIAF GAAQGLDYLH DKVTPAVIYR
201: DLKASNILLD AEFYPKLCDF GLHNLEPGTG DSLFLSSRVM DTYGYSAPEY TRGDDLTVKS DVYSFGVVLL ELITGRRAID TTKPNDEQNL VAWAQPIFKD
301: PKRYPDMADP LLRKNFSERG LNQAVAITSM CLQEEPTARP LISDVMVALS FLSMSTEDGI PATVPMESFR DKSMSIALSR HGSCSVTPFC ISRKDVGNKS
401: SSSSDSEDEE EEKEQKAEKE EESTSKKRQE QEETATDSDD ESDSNSEKDQ EEEQSQLEKA RESSSSSSDS GSERRSIDET NATAQSLKIS YSNYSSEEED
501: NEKLSSKSSC KSNEESTFSR YDSGRDHDDS SRNTSMRINS LAHDDKEEDE EENHETRSYS DHDDSPRNTS MRINSLSHDD DEEEEEENHQ TRLEHIHSSK
601: SEDQSVYSDD DAGESGESSL HRIEAKEEEH ISSDHD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)