AT5G62750.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 24942 Blast hits to 11726 proteins in 897 species: Archae - 48; Bacteria - 2086; Metazoa - 8361; Fungi - 2243; Plants - 1040; Viruses - 210; Other Eukaryotes - 10954 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:25203677..25204051 | ||||||||||||||||||||
| Molecular Weight (calculated) | 14243.70 Da | ||||||||||||||||||||
| IEP (calculated) | 9.32 | ||||||||||||||||||||
| GRAVY (calculated) | -2.02 | ||||||||||||||||||||
| Length | 124 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGETEEKVKN HDNKEEEHNK AEKAEKKEKK KDKDKKDKNE DDKNGGGEEG EDQEKKSKKK DKKAKKEKNP EDKKDPEKLK MKLQKIEEKI QAMVLKKDEI 101: VKLIHDAEQA KPSTAAVDAP PPTN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)