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AT5G15970.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:19329564 (2009): peroxisome
  • PMID:18431481 (2008): plastid
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)
Curator
Summary (TAIR10)
Encodes a gene that can be induced by cold and abscisic acid and may be involved in cold acclimation and salt tolerance.
Computational
Description (TAIR10)
KIN2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to abscisic acid stimulus, response to osmotic stress; LOCATED IN: nucleus, chloroplast, plasma membrane, cytoplasm; BEST Arabidopsis thaliana protein match is: stress-responsive protein (KIN1) / stress-induced protein (KIN1) (TAIR:AT5G15960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JVIFeggNOG:ENOG41105VPEMBL:AB493752EMBL:AL391145
EnsemblPlants:AT5G15970EnsemblPlants:AT5G15970.1entrez:831454ExpressionAtlas:C0SVP9
GeneID:831454GO:GO:0005737Gramene:AT5G15970.1hmmpanther:PTHR34191
hmmpanther:PTHR34191:SF2IntAct:P31169KEGG:ath:AT5G15970PaxDb:C0SVP9
Pfam:P31169PhylomeDB:C0SVP9PRIDE:C0SVP9PRO:PR:P31169
ProteinModelPortal:C0SVP9ProteinModelPortal:P31169Proteomes:UP000006548RefSeq:NP_197101.1
STRING:3702.AT5G15970.1TAIR:AT5G15970tair10-symbols:COR6.6tair10-symbols:KIN2
UniGene:At.22305UniGene:At.27428UniGene:At.46639UniProt:C0SVP9
UniProt:P31169
Coordinates (TAIR10) chr5:+:5211966..5212441
Molecular Weight (calculated) 6551.60 Da
IEP (calculated) 9.92
GRAVY (calculated) -0.46
Length 66 amino acids
Sequence (TAIR10)
(BLAST)
1: MSETNKNAFQ AGQAAGKAEE KSNVLLDKAK DAAAAAGASA QQAGKSISDA AVGGVNFVKD KTGLNK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)