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AT4G31940.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.588
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 82, subfamily C, polypeptide 4
Curator
Summary (TAIR10)
member of CYP82C
Computational
Description (TAIR10)
cytochrome P450, family 82, subfamily C, polypeptide 4 (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G31940-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156
EMBL:AL021636EMBL:AL161580EMBL:AY090995EMBL:CP002687
EnsemblPlants:AT4G31940EnsemblPlants:AT4G31940.1entrez:829324Gene3D:1.10.630.10
GeneID:829324Genevisible:Q9SZ46GO:GO:0004497GO:GO:0005506
GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0020037
GO:GO:0044550GO:GO:0071281Gramene:AT4G31940.1hmmpanther:PTHR24298
hmmpanther:PTHR24298:SF172HOGENOM:HOG000218627InParanoid:Q9SZ46InterPro:IPR001128
InterPro:IPR002401InterPro:IPR017972iPTMnet:Q9SZ46KEGG:ath:AT4G31940
KO:K00517OMA:MIVRMVAPaxDb:Q9SZ46Pfam:PF00067
Pfam:Q9SZ46PhylomeDB:Q9SZ46PIR:T04651PRIDE:Q9SZ46
PRINTS:PR00385PRINTS:PR00463PRO:PR:Q9SZ46PROSITE:PS00086
ProteinModelPortal:Q9SZ46Proteomes:UP000006548RefSeq:NP_194922.1scanprosite:PS00086
SMR:Q9SZ46STRING:3702.AT4G31940.1SUPFAM:SSF48264TAIR:AT4G31940
tair10-symbols:CYP82C4TMHMM:TMhelixUniGene:At.31700UniProt:Q9SZ46
Coordinates (TAIR10) chr4:+:15452040..15453966
Molecular Weight (calculated) 58922.80 Da
IEP (calculated) 7.89
GRAVY (calculated) -0.10
Length 524 amino acids
Sequence (TAIR10)
(BLAST)
001: MDTSLFSLFV PILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLQLGSNEAF VVSSFEVAKD CFTVNDKALA
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)