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AT4G31810.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:23444301 (2013): mitochondrion
  • PMID:23444301 (2013): mitochondrion mitochondrial matrix
  • PMID:14671022 (2004): mitochondrion
  • PMID:11743115 (2001): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATP-dependent caseinolytic (Clp) protease/crotonase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT3G60510.1); Has 22679 Blast hits to 22670 proteins in 1880 species: Archae - 357; Bacteria - 15693; Metazoa - 1078; Fungi - 640; Plants - 575; Viruses - 0; Other Eukaryotes - 4336 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G31810-MONOMEREC:3.1.2.-eggNOG:COG1024eggNOG:KOG1684EMBL:AL049607EMBL:AL161579EMBL:AY080787
EMBL:AY114019EMBL:CP002687EnsemblPlants:AT4G31810EnsemblPlants:AT4G31810.1entrez:829310Gene3D:3.90.226.10GeneID:829310
Genevisible:Q8RXN4GO:GO:0005739GO:GO:0016787GO:GO:0016836Gramene:AT4G31810.1gramene_pathway:3.1.2.4gramene_pathway:PWY-3941
gramene_pathway:VALDEG-PWYhmmpanther:PTHR11941hmmpanther:PTHR11941:SF96HOGENOM:HOG000217005InParanoid:Q8RXN4InterPro:IPR029045InterPro:IPR032259
iPTMnet:Q8RXN4KEGG:ath:AT4G31810KO:K05605ncoils:CoilOMA:RLYESWEPaxDb:Q8RXN4Pfam:PF16113
Pfam:Q8RXN4PhylomeDB:Q8RXN4PIR:T06303PRIDE:Q8RXN4PRO:PR:Q8RXN4ProteinModelPortal:Q8RXN4Proteomes:UP000006548
Reactome:R-ATH-70895RefSeq:NP_194909.2SMR:Q8RXN4STRING:3702.AT4G31810.1SUPFAM:SSF52096TAIR:AT4G31810UniGene:At.31711
UniProt:Q8RXN4
Coordinates (TAIR10) chr4:-:15387365..15390290
Molecular Weight (calculated) 45502.30 Da
IEP (calculated) 4.86
GRAVY (calculated) -0.20
Length 409 amino acids
Sequence (TAIR10)
(BLAST)
001: MQTVKALRRV SEPLQWVRSV SYGRRFSALP NYSASDADFE DQVLVEGKAK SRAAILNNPS SLNALSAPMV GRLKRLYESW EENPAISFVL MKGSGKTFCS
101: GADVLSLYHS INEGNTEESK LFFENLYKFV YLQGTYLKPN IAIMDGVTMG CGGGISLPGM FRVATDKTVL AHPEVQIGFH PDAGASYYLS RLPGYLGEYL
201: ALTGQKLNGV EMIACGLATH YCLNARLPLI EERIGKLLTD DPAVIEDSLA QYGDLVYPDS SSVLHKIELI DKYFGLDTVE EIIEAMENEA ANSCNEWCKK
301: TLKQIKEASP LSLKITLQSI REGRFQTLDQ CLTHEYRISI CGVSKVVSGD FCEGIRARLV DKDFAPKWDP PRLEDVSKDM VDCYFTPASE LDDSDSELKL
401: PTAQREPYF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)