AT1G04900.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF185) | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF185); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF185 (InterPro:IPR003788); Has 316 Blast hits to 314 proteins in 164 species: Archae - 0; Bacteria - 117; Metazoa - 2; Fungi - 113; Plants - 44; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:1383912..1387561 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50607.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.57 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||
| Length | 442 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAFVRYIPCR KIPRNVDQFE LPCLGSLRAF FSTQKLIGDE PVLVRDFIHT ALYDPIQGYF SQRSKSVGVL ERSIKFNQLE GRKAYMKLLE KVYKQSDISW 101: FTPVELFKPW YAHGIAEAIL RTTNLSVPLK IYEIGGGSGT CAKGVLDYIM LNAPERIYKN MSYTSIEISP SLAKIQKETV AQVGSHLSKF RVECRDASDL 201: AGWKNVEQQP CWVIMLEVLD NLPHDLVYSK SQLSPWMEVL VENKPESEAL SELYKPLEDP LIKRCIEIVE HEDDPVSKPK EIWSKLFPKP RRSWLPTGCL 301: KLLEVLHAKL PKMSLIASDF SFLPDVKVPG ERAPLVSTKK DGCSSDYSSY LDAKGDADIF FPTDFWLLER MDHYCSGWRK MEKDGTPSKK GRKRRTLTLD 401: TSAFMDEFGL PSKTRTKDGY NPLLDDFKNT KFYLSVPTHN TK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)