AT5G60730.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Anion-transporting ATPase | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Anion-transporting ATPase; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.1); Has 2815 Blast hits to 2379 proteins in 780 species: Archae - 173; Bacteria - 1911; Metazoa - 144; Fungi - 222; Plants - 104; Viruses - 0; Other Eukaryotes - 261 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:+:24422838..24425352 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42942.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.35 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||||||
| Length | 391 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAALLLLNRV SRSTSSISLH RVAGTLGFNS FNAQIHGDRI SGTLFRVRSL ATLAEGASHF NEMVSVNQRK YYLLGGKGGV GKTSCAASLA VKFASHGHPT 101: IVVSTDPAHS LSDSFSQDLS GGVLKPVQGV DSPLLALEIT PEIMKDEIKR QTGDKSVKNM MDSMGLGMFA GELGDLNLED MLNAASPGID EIAAISKVLQ 201: FMEAPEYSRF TRIVFDTAPT GHTLRLLSLP DFYDSSISKI TKLKKKITAA ASAFKLVFGK KEIQQKELPN ELDQLKERME KVRNVFRDVD TTEFVIVTIP 301: TVMAINESSR LHASLRKENV PVHRLIVNQL LPQSESDCKF CSIRRKEQTR VLGLIQNDTE LSGLKLIQSP LLDAEIRGVP ALKFMGDLIW K |
||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)