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AT4G27300.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.540
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:21533090 (2011): endoplasmic reticulum
  • PMID:21533090 (2011): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-locus lectin protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G27290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G27300-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410JXQH
EMBL:AL030978EMBL:AL161566EMBL:CP002687EnsemblPlants:AT4G27300
EnsemblPlants:AT4G27300.1entrez:828838Gene3D:2.60.120.200Gene3D:2.90.10.10
GeneID:828838Genevisible:O81833GO:GO:0004674GO:GO:0005516
GO:GO:0005524GO:GO:0005886GO:GO:0009506GO:GO:0016021
GO:GO:0030246GO:GO:0031625GO:GO:0048544Gramene:AT4G27300.1
hmmpanther:PTHR27002hmmpanther:PTHR27002:SF9HOGENOM:HOG000116559InParanoid:O81833
InterPro:IPR000719InterPro:IPR000858InterPro:IPR001245InterPro:IPR001480
InterPro:IPR003609InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR021820InterPro:IPR024171iPTMnet:O81833KEGG:04150+2.7.11.1
KEGG:04151+2.7.11.1KEGG:ath:AT4G27300OMA:TAPEDECPaxDb:O81833
Pfam:O81833Pfam:PF00954Pfam:PF01453Pfam:PF07714
Pfam:PF08276Pfam:PF11883Pfscan:PS50011Pfscan:PS50927
Pfscan:PS50948PhylomeDB:O81833PIR:T05754PIRSF:PIRSF000641
PRIDE:O81833PRO:PR:O81833PROSITE:PS00108PROSITE:PS50011
PROSITE:PS50927PROSITE:PS50948ProteinModelPortal:O81833Proteomes:UP000006548
RefSeq:NP_194460.1scanprosite:PS00108SMART:SM00108SMART:SM00220
SMART:SM00473SMR:O81833STRING:3702.AT4G27300.1SUPFAM:SSF51110
SUPFAM:SSF56112TAIR:AT4G27300TMHMM:TMhelixUniGene:At.32109
UniProt:O81833
Coordinates (TAIR10) chr4:-:13669308..13672348
Molecular Weight (calculated) 91879.60 Da
IEP (calculated) 6.89
GRAVY (calculated) -0.28
Length 815 amino acids
Sequence (TAIR10)
(BLAST)
001: MREIHSLFSL SLFLISSSLS VALDYNVITP KEFLKDGDTL SSPDQVFQLG FFSLDQEEQP QHRFLGLWYM EPFAVVWVAN RNNPLYGTSG FLNLSSLGDL
101: QLFDGEHKAL WSSSSSSTKA SKTANNPLLK ISCSGNLISS DGEEAVLWQS FDYPMNTILA GMKLGKNFKT QMEWSLSSWK TLKDPSPGDF TLSLDTRGLP
201: QLILRKNGDS SYSYRLGSWN GLSFTGAPAM GRENSLFDYK FTSSAQEVNY SWTPRHRIVS RLVLNNTGKL HRFIQSKQNQ WILANTAPED ECDYYSICGA
301: YAVCGINSKN TPSCSCLQGF KPKSGRKWNI SRGAYGCVHE IPTNCEKKDA FVKFPGLKLP DTSWSWYDAK NEMTLEDCKI KCSSNCSCTA YANTDIREGG
401: KGCLLWFGDL VDMREYSSFG QDVYIRMGFA KIEFKGREVV GMVVGSVVAI AVVLVVVFAC FRKKIMKRYR GENFRKGIEE EDLDLPIFDR KTISIATDDF
501: SYVNFLGRGG FGPVYKGKLE DGQEIAVKRL SANSGQGVEE FKNEVKLIAK LQHRNLVRLL GCCIQGEECM LIYEYMPNKS LDFFIFDERR STELDWKKRM
601: NIINGVARGI LYLHQDSRLR IIHRDLKAGN VLLDNDMNPK ISDFGLAKSF GGDQSESSTN RVVGTYGYMP PEYAIDGHFS VKSDVFSFGV LVLEIITGKT
701: NRGFRHADHD LNLLGHVWKM WVEDREIEVP EEEWLEETSV IPEVLRCIHV ALLCVQQKPE DRPTMASVVL MFGSDSSLPH PTQPGFFTNR NVPDISSSLS
801: LRSQNEVSIT MLQGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)