AT3G51620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : PAP/OAS1 substrate-binding domain superfamily | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
PAP/OAS1 substrate-binding domain superfamily; BEST Arabidopsis thaliana protein match is: nucleotidyltransferases (TAIR:AT3G61690.1); Has 270 Blast hits to 218 proteins in 57 species: Archae - 0; Bacteria - 2; Metazoa - 18; Fungi - 29; Plants - 185; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:19143859..19147891 | ||||||||||||||||||||
| Molecular Weight (calculated) | 84744.90 Da | ||||||||||||||||||||
| IEP (calculated) | 5.71 | ||||||||||||||||||||
| GRAVY (calculated) | -0.68 | ||||||||||||||||||||
| Length | 755 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAADLDDLEE ESSSSLSPPL LPPPRSPLNQ PELWMRVEEA TREIIEQVHP TLVSEDRRRD VILYVQKLIR MTLGCEVHSF GSVPLKTYLP DGDIDLTAFG 101: GLYHEEELAA KVFAVLEREE HNLSSQFVVK DVQLIRAEVK LVKCLVQNIV VDISFNQIGG ICTLCFLEKV LYKFLDYFSK FDWDSYCISL NGPVCLSSLP 201: DIVVETPENG GEDLLLTSEF LKECLEMYSV PSRGFETNPR GFQSKHLNIV DPLKETNNLG RSVSKGNFYR IRSAFTYGAR KLGQLFLQSD EAISSELRKF 301: FSNMLLRHGS GQRPDVHDAI PFLRYNRYNA ILPASNHFQE GQVVNESESS SSSGATGNGR HDQEDSLDAG VSIPSTTGPD LSGSPGETVP SVSEERFSGD 401: AKDLATLRIQ KLEISDDAMK SPCLSDKESD SPLNGKHHSF NQMRNGEVLN GNGVGKQQEN SWHTGSRRVK DIHINENENE HVGYEDLPFA SAVPWPQEDM 501: HLHYSGHCVS GTPNMLSDLS GDYESQLNSL RFGRWWFDYV QNGPMSPLSP PGLPQLPNNN SWEVMRHALP FRRNAPTPVN ANGVVPRQVF FHVNPQMIPG 601: PGFGIEELPK PRGTGTYFPN ANHYRDRPFS PRGRNSHQAR SPRNNGRSMS QAHSEMNFPD RNTRERQLHY PNQTNGSCDM SHTDSLDSFP DTNGSTNHPY 701: EKAPDFRPTE PLPVEVLSPP EDSKPRDSIE GHHNRPHRPK PRPSSTQEER DVHVG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)