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AT3G42880.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G20690.1); Has 99886 Blast hits to 64132 proteins in 3251 species: Archae - 77; Bacteria - 7250; Metazoa - 18347; Fungi - 2712; Plants - 63147; Viruses - 166; Other Eukaryotes - 8187 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G42880-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IH1Y
EMBL:AL138654EMBL:CP002686EMBL:DQ446723EMBL:FJ708731
EnsemblPlants:AT3G42880EnsemblPlants:AT3G42880.1entrez:823335Gene3D:3.80.10.10
GeneID:823335Genevisible:Q9M1L7GO:GO:0004674GO:GO:0005524
GO:GO:0009506GO:GO:0016021GO:GO:0080092Gramene:AT3G42880.1
hmmpanther:PTHR27008hmmpanther:PTHR27008:SF16HOGENOM:HOG000116554InterPro:IPR000719
InterPro:IPR001611InterPro:IPR011009InterPro:IPR013210InterPro:IPR032675
KEGG:ath:AT3G42880OMA:EVMTGKFPaxDb:Q9M1L7Pfam:PF00069
Pfam:PF00560Pfam:PF08263Pfam:PF13855Pfam:Q9M1L7
Pfscan:PS50011PhylomeDB:Q9M1L7PIR:T47346PRIDE:Q9M1L7
PRO:PR:Q9M1L7PROSITE:PS50011ProteinModelPortal:Q9M1L7Proteomes:UP000006548
RefSeq:NP_189874.1SMR:Q9M1L7STRING:3702.AT3G42880.1SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT3G42880TMHMM:TMhelixUniGene:At.65224
UniProt:Q9M1L7
Coordinates (TAIR10) chr3:+:14954587..14956577
Molecular Weight (calculated) 70252.80 Da
IEP (calculated) 8.37
GRAVY (calculated) -0.26
Length 633 amino acids
Sequence (TAIR10)
(BLAST)
001: MTAVLFLCFL LICFSFTPSL QNVSESEPLV RFKRSVNITK GDLNSWRTGT DPCNGKWFGI YCQKGQTVSG IHVTRLGLSG TINIEDLKDL PNLRTIRLDN
101: NLLSGPLPPF FKLPGLKSLL LSNNSFSGEI ADDFFKETPQ LKRVFLDNNR LSGKIPASLM QLAGLEELHM QGNQFTGEIP PLTDGNKVLK SLDLSNNDLE
201: GEIPITISDR KNLEMKFEGN QRLCGSPLNI ECDEKPSSTG SGNEKNNTAK AIFMVILFLL IFLFVVAIIT RWKKKRQPEF RMLGKDHLSD QESVEVRVPD
301: SIKKPIDSSK KRSNAEGSSK KGSSHNGKGA GGGPGSGMGD IIMVNSEKGS FGLPDLMKAA AEVLGNGSLG SAYKAVMANG LSVVVKRIRD MNKLAREAFD
401: TEMQRFGKLR HPNVLTPLAY HYRREEKLVV SEYMPKSSLL YVLHGDRGVY HSELTWATRL KIIQGVARGM DFLHEEFASY DLPHGNLKSS NVLLSETYEP
501: LISDYAFLPL LQPNNASQAL FAFKSPEFVQ NQQVSPKSDV YCLGIIVLEV MTGKFPSQYL NTGKGGTDIV EWVQSSIAQH KEEELIDPEI ASNTDSIKQM
601: VELLRIGAAC IASNPNERQN MKEIVRRIER VTL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)