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AT3G15450.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 0.736
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Aluminium induced protein with YGL and LRDR motifs
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT4G27450.1); Has 430 Blast hits to 430 proteins in 86 species: Archae - 0; Bacteria - 40; Metazoa - 2; Fungi - 2; Plants - 364; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Protein Annotations
DNASU:820784eggNOG:ENOG410IF0ZeggNOG:ENOG410YD56EMBL:AB022218EMBL:AC024081EMBL:AY037223EMBL:BT000501
EMBL:CP002686EnsemblPlants:AT3G15450EnsemblPlants:AT3G15450.1entrez:820784ExpressionAtlas:Q9LE80Gene3D:3.60.20.10GeneID:820784
Gramene:AT3G15450.1hmmpanther:PTHR11772hmmpanther:PTHR11772:SF14HOGENOM:HOG000240407IntAct:Q9LE80InterPro:IPR024286InterPro:IPR029055
OMA:YWGISGDPfam:PF12481PhylomeDB:Q9LE80Proteomes:UP000006548RefSeq:NP_566513.1SMART:SM01172STRING:3702.AT3G15450.1
SUPFAM:SSF56235TAIR:AT3G15450UniGene:At.25100UniGene:At.48664UniProt:Q9LE80
Coordinates (TAIR10) chr3:+:5213050..5213998
Molecular Weight (calculated) 27701.80 Da
IEP (calculated) 7.07
GRAVY (calculated) -0.23
Length 253 amino acids
Sequence (TAIR10)
(BLAST)
001: MLAIFQKAFA HPPEELNSPA SHFSGKTPKL PGETLSDFLS HHQNNAFSMN FGDSAVLAYA RQETSLRQRL FCGLDGIYCM FLGRLNNLCT LNRQYGLSGK
101: NSNEAMFVIE AYRTLRDRGP YPADQVLRGL EGSFAFVVYD TQTSSVFSAL SSDGGESLYW GISGDGSVVM SDDIQIIKQG CAKSFAPFPN GCMFHSETGL
201: KSFDHPTNMM KAMPRIDSEG VLCGASFKVD ACSKINSIPR RGSEANWALA NSR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)