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AT3G15351.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 50 Blast hits to 50 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWQ3eggNOG:ENOG41120I3EMBL:AP000413EMBL:AY087430
EMBL:BT020315EMBL:BT020547EMBL:CP002686EnsemblPlants:AT3G15351
EnsemblPlants:AT3G15351.1entrez:820769ExpressionAtlas:Q9LJR1GeneID:820769
Gramene:AT3G15351.1hmmpanther:PTHR21162hmmpanther:PTHR21162:SF0InterPro:IPR030482
ncoils:CoilOMA:CATCGNHPANTHER:PTHR21162:SF0PhylomeDB:Q9LJR1
Proteomes:UP000006548RefSeq:NP_566507.1TAIR:AT3G15351UniGene:At.39062
UniProt:Q9LJR1
Coordinates (TAIR10) chr3:+:5176726..5177531
Molecular Weight (calculated) 18339.10 Da
IEP (calculated) 5.11
GRAVY (calculated) -0.34
Length 165 amino acids
Sequence (TAIR10)
(BLAST)
001: MDLDPKKFAA LLDKIEAEAD EFLLARNQMV ENDKERNANR EALTALRKRA RTTKTSVMSP FDSMMKDIHG SSTKPLVQEV CSTCGSHDSS EPTWMMLPGA
101: DLFAAIPFHA VHTMLEKDEE KMEFESKKLQ SLVKEKALFI SELGALADGI SPGVIRSLVA LEDKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)