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AT3G12620.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G55050.2); Has 5481 Blast hits to 5477 proteins in 322 species: Archae - 0; Bacteria - 80; Metazoa - 1469; Fungi - 574; Plants - 2401; Viruses - 2; Other Eukaryotes - 955 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G12620-MONOMERBioCyc:ARA:GQT-2668-MONOMERBioGrid:5776DNASU:820442EC:3.1.3.16eggNOG:COG0631eggNOG:KOG0700
EMBL:AC069474EMBL:AK227879EMBL:AK317334EMBL:AK317402EMBL:AP002044EMBL:BT004824EMBL:CP002686
EnsemblPlants:AT3G12620EnsemblPlants:AT3G12620.1EnsemblPlants:AT3G12620.2entrez:820442Gene3D:3.60.40.10GeneID:820442Genevisible:Q9LHJ9
GO:GO:0004722GO:GO:0046872Gramene:AT3G12620.1Gramene:AT3G12620.2hmmpanther:PTHR13832hmmpanther:PTHR13832:SF358HOGENOM:HOG000238703
InParanoid:Q9LHJ9IntAct:Q9LHJ9InterPro:IPR000222InterPro:IPR001932InterPro:IPR015655KEGG:ath:AT3G12620OMA:DANGRCD
PANTHER:PTHR13832PaxDb:Q9LHJ9Pfam:PF00481Pfam:Q9LHJ9Pfscan:PS51746PhylomeDB:Q9LHJ9PRIDE:Q9LHJ9
PRO:PR:Q9LHJ9PROSITE:PS01032PROSITE:PS51746ProteinModelPortal:Q9LHJ9Proteomes:UP000006548RefSeq:NP_001030682.1RefSeq:NP_187868.2
scanprosite:PS01032SMART:SM00332SMR:Q9LHJ9STRING:3702.AT3G12620.1SUPFAM:SSF81606TAIR:AT3G12620TMHMM:TMhelix
UniGene:At.27990UniProt:Q9LHJ9
Coordinates (TAIR10) chr3:-:4009510..4010993
Molecular Weight (calculated) 42853.70 Da
IEP (calculated) 9.85
GRAVY (calculated) -0.22
Length 385 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)