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AT3G03860.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.830
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : APR-like 5
Curator
Summary (TAIR10)
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.
Computational
Description (TAIR10)
APR-like 5 (APRL5); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 7 (TAIR:AT5G18120.1); Has 278 Blast hits to 278 proteins in 73 species: Archae - 0; Bacteria - 38; Metazoa - 82; Fungi - 10; Plants - 137; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111M6ZeggNOG:KOG2640EMBL:AC009540EMBL:AY059721EMBL:AY091351EMBL:CP002686EnsemblPlants:AT3G03860
EnsemblPlants:AT3G03860.1entrez:821101Gene3D:3.40.30.10GeneID:821101Genevisible:Q93YX4GO:GO:0003756GO:GO:0005623
GO:GO:0006457GO:GO:0016021GO:GO:0034976GO:GO:0045454Gramene:AT3G03860.1hmmpanther:PTHR18929hmmpanther:PTHR18929:SF84
HOGENOM:HOG000239500InterPro:IPR012336InterPro:IPR013766KEGG:ath:AT3G03860OMA:VRPKFDMPaxDb:Q93YX4Pfam:PF00085
Pfam:Q93YX4Pfscan:PS51257PhylomeDB:Q93YX4PRIDE:Q93YX4PRO:PR:Q93YX4ProteinModelPortal:Q93YX4Proteomes:UP000006548
RefSeq:NP_566214.1STRING:3702.AT3G03860.1SUPFAM:SSF52833TAIR:AT3G03860tair10-symbols:APRL5tair10-symbols:ATAPRL5TMHMM:TMhelix
UniGene:At.18353UniGene:At.74853UniProt:Q93YX4
Coordinates (TAIR10) chr3:+:992465..994315
Molecular Weight (calculated) 33651.60 Da
IEP (calculated) 7.50
GRAVY (calculated) 0.09
Length 300 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSRVSILFV CAIAVSCFTS GSASSPVDFS VCNYEFELFR FDLEAKCPPS LYPTPPIEVD GDSLDRLMAS QHGNAYMSVL FYASWCPFSR AVRPKFDMLS
101: SMFPQIQHLA VEHSQALPSV FSRYGIHSLP SILMVNQTLN ARYHGRKDLI SLIEFYEEAT GLQPVQYVAE GEPTGLNAGD GNLITWLRKG TSIREIFKQD
201: PFLVLSLLFI CLQMAILVFP IAESRMRALW ASYVANLNLG RFGEISQLFN RGIHMVDVRR LWLKLSLVKT RNFHERAKNA QAWASSLASV SLGQTSSDQS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)