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AT2G41220.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutamate synthase 2
Curator
Summary (TAIR10)
Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression is most abundant in root.
Computational
Description (TAIR10)
glutamate synthase 2 (GLU2); FUNCTIONS IN: glutamate synthase (ferredoxin) activity; INVOLVED IN: oxidation reduction, nitrogen compound metabolic process, glutamate biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 1 (TAIR:AT5G04140.1); Has 17295 Blast hits to 17192 proteins in 1999 species: Archae - 278; Bacteria - 5572; Metazoa - 117; Fungi - 161; Plants - 174; Viruses - 0; Other Eukaryotes - 10993 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G41220-MONOMERBioGrid:4058BRENDA:1.4.7.1EC:1.4.7.1eggNOG:COG0067eggNOG:COG0069eggNOG:COG0070
eggNOG:KOG0399EMBL:AC005662EMBL:CP002685EMBL:U39288EnsemblPlants:AT2G41220EnsemblPlants:AT2G41220.1entrez:818721
Gene3D:2.160.20.60Gene3D:3.20.20.70Gene3D:3.60.20.10GeneID:818721Genevisible:Q9T0P4GO:GO:0006537GO:GO:0009507
GO:GO:0009536GO:GO:0009570GO:GO:0009941GO:GO:0015930GO:GO:0016041GO:GO:0019676GO:GO:0046872
GO:GO:0051538GO:GO:0097054Gramene:AT2G41220.1gramene_pathway:1.4.1.14gramene_pathway:GLUGLNSYN-PWYgramene_pathway:PWY-3282hmmpanther:PTHR11938
hmmpanther:PTHR11938:SF94HOGENOM:HOG000031558InParanoid:Q9T0P4InterPro:IPR002489InterPro:IPR002932InterPro:IPR006982InterPro:IPR013785
InterPro:IPR017932InterPro:IPR029055iPTMnet:Q9T0P4KEGG:ath:AT2G41220KO:K00284ncoils:CoilOMA:HGRENDI
PaxDb:Q9T0P4Pfam:PF00310Pfam:PF01493Pfam:PF01645Pfam:PF04898Pfam:Q9T0P4Pfscan:PS51278
PhylomeDB:Q9T0P4PIR:C84839PRIDE:Q9T0P4PRO:PR:Q9T0P4PROSITE:PS51278ProteinModelPortal:Q9T0P4Proteomes:UP000006548
RefSeq:NP_181655.1STRING:3702.AT2G41220.1SUPFAM:SSF51395SUPFAM:SSF56235SUPFAM:SSF69336TAIR:AT2G41220tair10-symbols:GLU2
UniGene:At.21033UniPathway:UPA00045UniPathway:UPA00634UniProt:Q9T0P4
Coordinates (TAIR10) chr2:+:17177934..17188388
Molecular Weight (calculated) 177762.00 Da
IEP (calculated) 6.99
GRAVY (calculated) -0.21
Length 1629 amino acids
Sequence (TAIR10)
(BLAST)
0001: MALQSPGATG ASSSVSRLLS SAKLSSTKTI FSVDFVRSYC ISKGTKRRNE LSGFRGYSPL LKSSLRSPFS VKAILNSDRA AGDASSSFSD LKPQVAYLED
0101: IISERGACGV GFIANLENKA THKIVNDALI ALGCMEHRGG CGSDNTSGDG SGLMTSIPWD LFNEWAEKQG IASFDRTHTG VGMLFLPRDD NIRKEAKKVI
0201: TSIFEKEGLE VLGWRDVPVE ASIVGHNAKQ TMPNTEQVFV RIVKDDKVDD VERELYICRK LIERAVASES WASELYFSSL SNQTIVYKGM LRSEVLGLFY
0301: PDLQNDLYKS PFAIYHRRFS TNTSPRWHLA QPMRFLGHNG EINTIQGNLN WMTSREASLR SPVWHGREND IRPISNPKAS DSANLDSAAE LLIRSGRTPE
0401: ESLMILVPEA YKNHPTLMIK YPEAVDFYDY YKGQMEPWDG PALVLFSDGK TVGACLDRNG LRPARYWRTS DNVVYVASEV GVLPMDESKV TMKGRLGPGM
0501: MISVDLENGQ VYENTEVKKR VASYNPYGKW VSENLRNLKP SNYLSSAILE TDETLRRQQA FGYSSEDVQM VIESMAAQGK EPTFCMGDDT PVAVLSQKPH
0601: MLYDYFKQRF AQVTNPAIDP LREGLVMSLE VNIGKRGNIL EVGPQNVSQV VLSGPVLNER ELEGLLGDPL LKSQILPTFF DIRRGIEGSL KKGLLKLCEA
0701: ADEAVRNGSQ VLVLSDRSDN PEPTRPAIPM LLAVGAVHQH LIQNGLRMSA SIIADTAQCF STHHFACLIG YGASAICPHL ALETCRQWRL SNKTVNMMRN
0801: GKMPTVTMEQ AQKNYRKAVN TGLLKVLSKM GISLFSSYCG AQIFEIYGLG NEVVEFSFRG SASQIGGLTL DELARETLTF WVRAFSEDTA KRLENFGFIQ
0901: FRPGGEYHGN NPEMSKLLHK AVREKSETAY AVYQQHLANR PITVFRDLLE FKSDRNPIPV GKVEPASSIV ERFCTGGMSL GAISRETHET IAIAMNRLGG
1001: KSNSGEGGED PIRWKPLTDV VDGYSSTLPH LKGLRNGDTA TSAIKQVASG RFGVTPTFLV NADQLEIKVA QGAKPGEGGQ LPGKKVSAYI ARLRNSKPGV
1101: PLISPPPHHD IYSIEDLAQL IFDLHQVNPK AKVSVKLVSE TGIGTVASGV AKANADIIQI SGYDGGTGAS PISSIKHAGG PWELGLAETQ KTLIGNGLRE
1201: RVIIRVDGGF KSGVDVLIAA AMGADEYGFG TLAMIATGCI MARICHTNNC PVGVASQREE LRARFPGLPG DLVNFFLYIA EEVRGILAQL GYEKLDDIIG
1301: RTDLLKARDI SLVKTHLDLS YLLSSVGLPK RSSTSIRKQE VHSNGPVLDD TLLQDPEIMD AIENEKTVHK TMSIYNVDRS VCGRIAGVIA KKYGDTGFAG
1401: QLNLTFTGSA GQSFACFLTP GMNIRLVGEA NDYVGKGMAG GEVVILPVES TGFRPEDATI VGNTCLYGAT GGLLFVRGKA GERFAVRNSL AQAVVEGTGD
1501: HCCEYMTGGC VVILGKVGRN VAAGMTGGLA YILDEDNTLL PKMNKEIVKI QRVTSPVGQT QLKSLIQAHV EKTGSSKGAM IVEEWDKYLA MFWQLVPPSE
1601: EDTPEANSDH ILKTTTGDEE QVSSTLAEK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)