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AT2G26600.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.983
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Glycosyl hydrolase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G15800.1); Has 2133 Blast hits to 2119 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 2120; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G26600-MONOMERCAZy:GH17eggNOG:ENOG410IHGKeggNOG:ENOG410YEZD
EMBL:AC002505EMBL:CP002685EnsemblPlants:AT2G26600EnsemblPlants:AT2G26600.1
entrez:817201ExpressionAtlas:O48727Gene3D:3.20.20.80GeneID:817201
GO:GO:0004553GO:GO:0005975GO:GO:0031225Gramene:AT2G26600.1
hmmpanther:PTHR32227hmmpanther:PTHR32227:SF129HOGENOM:HOG000238220InterPro:IPR000490
InterPro:IPR013781InterPro:IPR017853KEGG:ath:AT2G26600OMA:SENARTY
Pfam:PF00332PhylomeDB:O48727PIR:T00993Proteomes:UP000006548
RefSeq:NP_565627.1SMR:O48727SUPFAM:SSF51445TAIR:AT2G26600
UniGene:At.12391UniProt:O48727
Coordinates (TAIR10) chr2:+:11316727..11318215
Molecular Weight (calculated) 43240.90 Da
IEP (calculated) 8.77
GRAVY (calculated) -0.12
Length 388 amino acids
Sequence (TAIR10)
(BLAST)
001: MRSSKLLLLK FFFFFFFNLT SLEYQVDGAF VGTYGINYGR IADNIPSPEK VVLLLKQAKI RNVRIYDVDH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)