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AT2G18750.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Calmodulin-binding protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT5G57580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJDWeggNOG:ENOG4111EYIEMBL:AB493554EMBL:AC005724EMBL:AF424622EMBL:AY143850EMBL:CP002685
EnsemblPlants:AT2G18750EnsemblPlants:AT2G18750.1EnsemblPlants:AT2G18750.2EnsemblPlants:AT2G18750.3entrez:816390GeneID:816390Genevisible:C0SV51
GO:GO:0003677GO:GO:0005634GO:GO:0006351GO:GO:0006355GO:GO:0006950hmmpanther:PTHR31713hmmpanther:PTHR31713:SF12
HOGENOM:HOG000237471InParanoid:C0SV51InterPro:IPR012416KEGG:ath:AT2G18750ncoils:CoilOMA:PPEINSYPaxDb:C0SV51
Pfam:C0SV51Pfam:PF07887PhylomeDB:C0SV51PIR:B84568PRIDE:C0SV51PRO:PR:C0SV51Proteomes:UP000006548
RefSeq:NP_001031372.1RefSeq:NP_001189550.1RefSeq:NP_565441.2STRING:3702.AT2G18750.1TAIR:AT2G18750UniGene:At.20176UniProt:C0SV51
Coordinates (TAIR10) chr2:+:8125827..8128363
Molecular Weight (calculated) 70203.60 Da
IEP (calculated) 5.29
GRAVY (calculated) -0.64
Length 622 amino acids
Sequence (TAIR10)
(BLAST)
001: MQTRYMERTN SMREKRKLEE DDNQQQQQQP ERKRPALASV IVEALKMDSL QRLCSSLEPI LRRVVSEEVE RALAKLGPAR LSERSSPKRI EGIGGRNLQL
101: QFRSRLSVPL FTGGKIEGEQ GAAIHVVLLD MTTGHVLTVG PEASAKLDVV VLDGDFNTED DDGWSGEEFE GHLVKERQGK RPLLTGDVQV TLKEGVGTLG
201: ELIFTDNSSW IRCRKFRLGL RVSSGYCEGM RVREAKTEAF TVKDHRGELY KKHYPPALDD EVWRLEKIGK DGAFHKKLNK AGIYNVKEFL RLMVKDSQKL
301: RTILGSGMSN RMWETLAEHS KTCVLSEMLY VYYPEDSVGV VFNNIYEFSG LISGKQYYPA DSLSDNQKGY VDGLVRKAYE NWEQVIEYDS KSLMNFNQVS
401: KTDDIDYSMP VSVPSQPSTS YSDVTVEAYN QSPASSFPGQ SQLADTTYMH FGNSSFAPQD QLVNNTHESQ SMINSNGGVR LALGPATGSQ NQEQLVHPPP
501: EINSYNDWSN TCNRGVDGFL SEEEIRARSN EMLENDDMQQ LLRLFSMNGG DQQTPLNMGE DSFGFHSFGQ TSMADYEEDR SNSGKAVVGW LKIKAAMRWG
601: FFIRRKAAQR RAQIVQLDED DE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)