AT2G17230.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : EXORDIUM like 5 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
EXORDIUM like 5 (EXL5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 1 (TAIR:AT2G35150.1); Has 402 Blast hits to 401 proteins in 25 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 398; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:7494892..7495983 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39642.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.60 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||
| Length | 363 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSPATTITF FFFFTLSSFF YITSSLQNNN NNKHTATVNS LNIPSAAAEI TLVNPKLPPR SLSLTSSKKF EGSSNLVHLR YHMGPVLSSS PINIYVIWYG 101: QWSRPHKSLI RDFLNSISDA KAPSPSVSEW WRTASLYTDQ TGSNVSRSVL IAGEYSDSKY SHGQHLTRLT IQEVIASAAR SASFPVDHKN GMYLVLTSHD 201: VTMQDFCRAV CGFHYFTFPS MVGYTMPYAW VGQSGKQCPE VCAYPFALPG YMGHGGPGEL RPPNGETGVD GMVSVIGHEL AEVVSNPLIN AWYAGEDPTA 301: PTEIGDLCEG LYGSGGGGGY IGQVMRDREG KTFNMNGKGG RKFLVQWIWN PNLKACSGPN SVD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)