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AT1G64060.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : respiratory burst oxidase protein F
Curator
Summary (TAIR10)
Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.
Computational
Description (TAIR10)
respiratory burst oxidase protein F (RBOH F); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G11230.1); Has 2419 Blast hits to 2261 proteins in 348 species: Archae - 6; Bacteria - 265; Metazoa - 742; Fungi - 676; Plants - 525; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G64060-MONOMERBioGrid:27931EC:1.11.1.-EC:1.6.3.-eggNOG:ENOG410XNZYeggNOG:KOG0039EMBL:AB008111
EMBL:AC007764EMBL:AF015301EMBL:AK228418EMBL:CP002684EnsemblPlants:AT1G64060EnsemblPlants:AT1G64060.1entrez:842710
Gene3D:1.10.238.10GeneID:842710Genevisible:O48538GO:GO:0002679GO:GO:0004601GO:GO:0005509GO:GO:0005622
GO:GO:0005886GO:GO:0007231GO:GO:0009723GO:GO:0009738GO:GO:0009873GO:GO:0010119GO:GO:0016021
GO:GO:0016174GO:GO:0033500GO:GO:0043069GO:GO:0050665GO:GO:0052542Gramene:AT1G64060.1hmmpanther:PTHR11972
hmmpanther:PTHR11972:SF69HOGENOM:HOG000216670InParanoid:O48538IntAct:O48538InterPro:IPR000778InterPro:IPR002048InterPro:IPR011992
InterPro:IPR013112InterPro:IPR013121InterPro:IPR013130InterPro:IPR013623InterPro:IPR017927InterPro:IPR017938InterPro:IPR018247
iPTMnet:O48538KEGG:ath:AT1G64060KO:K13447MINT:MINT-7260067ncoils:CoilOMA:FYQYKQKPaxDb:O48538
Pfam:O48538Pfam:PF01794Pfam:PF08022Pfam:PF08030Pfam:PF08414Pfscan:PS50222Pfscan:PS51384
PhylomeDB:O48538PIR:T03826PRIDE:O48538PRINTS:PR00466PRO:PR:O48538PROSITE:PS00018PROSITE:PS50222
PROSITE:PS51384ProteinModelPortal:O48538Proteomes:UP000006548Reactome:R-ATH-209968RefSeq:NP_564821.1scanprosite:PS00018SMR:O48538
STRING:3702.AT1G64060.1SUPFAM:SSF47473SUPFAM:SSF52343SUPFAM:SSF63380TAIR:AT1G64060tair10-symbols:ATRBOH Ftair10-symbols:ATRBOHF
tair10-symbols:RBOH Ftair10-symbols:RBOHAP108tair10-symbols:RBOHFTMHMM:TMhelixUniGene:At.235UniProt:O48538
Coordinates (TAIR10) chr1:+:23770266..23776317
Molecular Weight (calculated) 108424.00 Da
IEP (calculated) 9.54
GRAVY (calculated) -0.28
Length 944 amino acids
Sequence (TAIR10)
(BLAST)
001: MKPFSKNDRR RWSFDSVSAG KTAVGSASTS PGTEYSINGD QEFVEVTIDL QDDDTIVLRS VEPATAINVI GDISDDNTGI MTPVSISRSP TMKRTSSNRF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)