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AT1G63090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.976
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : phloem protein 2-A11
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phloem protein 2-A11 (PP2-A11); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 461 Blast hits to 455 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 461; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:27833eggNOG:ENOG410IG7CeggNOG:ENOG410Y934EMBL:AC010795
EMBL:AK228787EMBL:BT002971EMBL:BT024709EMBL:CP002684
EnsemblPlants:AT1G63090EnsemblPlants:AT1G63090.1entrez:842612GeneID:842612
Genevisible:Q9CAN4GO:GO:0005634GO:GO:0016567GO:GO:0030246
Gramene:AT1G63090.1hmmpanther:PTHR31960hmmpanther:PTHR31960:SF2HOGENOM:HOG000239667
InParanoid:Q9CAN4IntAct:Q9CAN4InterPro:IPR001810InterPro:IPR025886
KEGG:ath:AT1G63090OMA:QSIAYLQPaxDb:Q9CAN4Pfam:PF00646
Pfam:PF14299Pfam:Q9CAN4PhylomeDB:Q9CAN4PIR:C96656
PRIDE:Q9CAN4PRO:PR:Q9CAN4ProteinModelPortal:Q9CAN4Proteomes:UP000006548
RefSeq:NP_176497.1STRING:3702.AT1G63090.1SUPFAM:SSF81383TAIR:AT1G63090
tair10-symbols:AtPP2-A11tair10-symbols:PP2-A11UniGene:At.17747UniPathway:UPA00143
UniProt:Q9CAN4
Coordinates (TAIR10) chr1:-:23391283..23392609
Molecular Weight (calculated) 32556.70 Da
IEP (calculated) 7.95
GRAVY (calculated) -0.29
Length 289 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSGFSLFQK NLSSCYGDRD LLQPGLGDLP ESCVALILQN LDPVEICRFS KLNTAFHGAS WADFVWESKL PPDYKLILEK ILGSFPDNLR KRDIFTFLSR
101: VNSFDEGNKK AWVDKRTGGL CLCTSAKGLS ITGIDDRRYW SHIPSDDSRF ASVAYVQQIW WFQVDGEIDF PFPAGTYSVY FRLQLGKPGK RFGWKVVDTE
201: QVHGWNIKPV RFQLSTEDGQ HSSSQCMLTE AGNWSHYHAG DFVVGKSKSS STKIKFSMTQ IDCTHTKGGL CVDSVVVYPS SCKDRLMQI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)