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AT1G45130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta-galactosidase 5
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta-galactosidase 5 (BGAL5); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2206 Blast hits to 2062 proteins in 469 species: Archae - 15; Bacteria - 946; Metazoa - 364; Fungi - 218; Plants - 593; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G45130-MONOMERBRENDA:3.2.1.23CAZy:GH35EC:3.2.1.23
eggNOG:COG1874eggNOG:KOG0496EMBL:AC007915EMBL:AJ270301
EMBL:AY058098EMBL:AY069911EMBL:AY093977EMBL:CP002684
EnsemblPlants:AT1G45130EnsemblPlants:AT1G45130.1entrez:841080Gene3D:2.60.120.260
Gene3D:3.20.20.80GeneID:841080Genevisible:Q9MAJ7GO:GO:0004565
GO:GO:0005618GO:GO:0005975GO:GO:0048046Gramene:AT1G45130.1
hmmpanther:PTHR23421hmmpanther:PTHR23421:SF51HOGENOM:HOG000239919InParanoid:Q9MAJ7
InterPro:IPR001944InterPro:IPR008979InterPro:IPR013781InterPro:IPR017853
InterPro:IPR019801InterPro:IPR031330iPTMnet:Q9MAJ7KEGG:00052+3.2.1.23
KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23
KEGG:ath:AT1G45130ncoils:CoilOMA:QGSAYGTPANTHER:PTHR23421
PaxDb:Q9MAJ7Pfam:PF01301Pfam:Q9MAJ7PhylomeDB:Q9MAJ7
PRIDE:Q9MAJ7PRINTS:PR00742PRO:PR:Q9MAJ7PROSITE:PS01182
ProteinModelPortal:Q9MAJ7Proteomes:UP000006548RefSeq:NP_175127.1scanprosite:PS01182
SMR:Q9MAJ7STRING:3702.AT1G45130.1SUPFAM:SSF49785SUPFAM:SSF51445
TAIR:AT1G45130tair10-symbols:BGAL5TMHMM:TMhelixUniGene:At.24850
UniGene:At.69432UniProt:Q9MAJ7
Coordinates (TAIR10) chr1:+:17065447..17069110
Molecular Weight (calculated) 81447.80 Da
IEP (calculated) 8.37
GRAVY (calculated) -0.25
Length 732 amino acids
Sequence (TAIR10)
(BLAST)
001: MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)