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AT1G30260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J6DVeggNOG:ENOG411195EEMBL:AC073506EMBL:AY057696
EMBL:AY116947EMBL:CP002684EnsemblPlants:AT1G30260EnsemblPlants:AT1G30260.1
entrez:839906GeneID:839906GO:GO:0009735Gramene:AT1G30260.1
hmmpanther:PTHR35101hmmpanther:PTHR35101:SF1HOGENOM:HOG000152185IntAct:Q9C754
KEGG:ath:AT1G30260OMA:NMMETITPhylomeDB:Q9C754PIR:H86426
Proteomes:UP000006548RefSeq:NP_564352.1STRING:3702.AT1G30260.1TAIR:AT1G30260
UniGene:At.26235UniProt:Q9C754
Coordinates (TAIR10) chr1:+:10651159..10651452
Molecular Weight (calculated) 10587.50 Da
IEP (calculated) 10.56
GRAVY (calculated) -0.31
Length 97 amino acids
Sequence (TAIR10)
(BLAST)
1: MATSRLARFI TEVAPPQFVT VMRRRTAKVL DTIKEEEREV GTDSIFPSSF NSKKISSPFT SPYSSSVSSA SASASCTSGL NKFPVTENRG SFPVFKN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)